Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_P01
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   2.8  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   6.5  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   6.5  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
 Frame = -1

Query: 577 GSWKTPSKQKKNFNLPQP------KMANTDLTRFXKSDEIRKVLRAPNKRVIRATRKLN 419
           G  K P K+KK  +LP+P      K  N DL +  K       L+    +V +  R  N
Sbjct: 153 GQSKQPKKKKKKRSLPKPEAVVIEKCENIDLAKVLKGLTHDDALKDVGDQVAKVRRTQN 211


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -1

Query: 556 KQKKNFNLPQPKMANTDLTRFXKSDEIRKVLRAPNKRVIRATRKLNPLTN 407
           K+ KN+ + Q      DL+RF K  +  ++ R  ++ +++   K+ P  N
Sbjct: 40  KRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQR--HRAILQKRLKIPPPIN 87


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 567 RHHRNKRRTSTCPSQRWPTLTSHVXSSL--MRSGRSSVLPTNA 445
           +  + ++R    P+Q+WPT+   V +    +    SS +P  A
Sbjct: 196 QQQQKQQRQQRLPAQQWPTVQQSVRAQRQGVTESASSAVPDEA 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,496
Number of Sequences: 2352
Number of extensions: 8570
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)