Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_O21
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.14
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 29 0.58
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.77
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.77
SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51... 27 3.1
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 27 4.1
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 27 4.1
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 27 4.1
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 4.1
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 26 5.4
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 5.4
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 26 7.2
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 26 7.2
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 9.5
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 25 9.5
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.5
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.14
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = -1
Query: 498 SESDSDEMIKLNIKLNDRLYETVNSVKDKLTEMAHVKSLFDRKPSLKDSSQTSKAYEIIN 319
SES+ + ++K K + E+ +S + + E A VK + ++K S DSS S + E +
Sbjct: 120 SESEEEVIVKTEEK-KESSSESSSSSESEEEEEAVVK-IEEKKESSSDSSSESSSSESES 177
Query: 318 QTDSDEDFKYLEVIEDGE 265
++ S E + EV+E E
Sbjct: 178 ESSSSESEEEEEVVEKTE 195
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 29.5 bits (63), Expect = 0.58
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = -1
Query: 558 AWLEKAKLNDGVYAPCEIPLSE-SDSDEMIKLNIKLNDRLYETVN---SVKDKLTE---M 400
+W EK + D ++ +SE S S ++ N LNDR +ETVN S + T M
Sbjct: 769 SWFEKKQPIDS-----DVEISEPSRSASIMVANKDLNDRSFETVNRIVSTRASTTNASFM 823
Query: 399 AHVKSLFDRKPSLKD 355
+ V+ R PS KD
Sbjct: 824 SSVRQNLGRGPSTKD 838
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 29.1 bits (62), Expect = 0.77
Identities = 25/105 (23%), Positives = 52/105 (49%)
Frame = -1
Query: 546 KAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKLTEMAHVKSLFDRKP 367
K L D + E+ ++SD ++ +++D E+ NS K+ +++ + KP
Sbjct: 160 KGVLEDVLKKDNELKFNDSDEED------EVDDEEIESFNSFSRKMQTISNSRYRGSPKP 213
Query: 366 SLKDSSQTSKAYEIINQTDSDEDFKYLEVIEDGELEGCDVSLGGS 232
+++ S +S++ + ++Q DE+ + E+ E E DV L S
Sbjct: 214 NIEKQSCSSES-DRVSQISDDEEDEEGSADEEDE-EDSDVELSES 256
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 0.77
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 489 DSDEMIKLNIKLNDRLYETVNSVKDKLTEMAHVKSLFDRKPSLKDSSQTSKAYEIINQTD 310
DS +L+ N+ Y+ +S KL E S+ D+K D+ +++I N D
Sbjct: 496 DSTTPNELSKNANNENYDDDSSFYGKLAESVQEVSIADKK----DAEIVKDSFKIFNPED 551
Query: 309 SDEDFKYLEVIEDGEL 262
SD + E + G++
Sbjct: 552 SDLEKNITEALLTGDV 567
>SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51-b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -1
Query: 408 TEMAHVKSLFDRKPSLKDSSQTSKAYEIINQTDSDEDFKYLEVIEDGELEGCDVSLGGSQ 229
+E+A ++ L ++ LKD+ +K + Q+D +++F+ V G ++ +V L S+
Sbjct: 88 SEVALLQELL-KETGLKDTRDINKVFSPSKQSDENDNFRRYGV--SGGIQYSNVPLINSR 144
Query: 228 RMRNLK-DLDERNNELSLHISD*DAANA 148
N + + L+ HI DA+ A
Sbjct: 145 VTPNCESNCSNIRRRLTAHIISSDASTA 172
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 26.6 bits (56), Expect = 4.1
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = -1
Query: 660 AMYIMF-ITGAVXVITTIYILSFKVMFKNFEKN-----KDAWLEKAKLNDGVYAPCEIPL 499
A++I F I + I T+YI K F K+ KD+WL+++K ++ + L
Sbjct: 179 ALFITFSIVPIITGILTVYIYKKKYCVIKFNKSGRSKKKDSWLKRSK-DELLRTDSANLL 237
Query: 498 SESDSDE--MIKLNIKLNDRLYETV 430
+ +D+DE MI+ + K L+ T+
Sbjct: 238 TLNDNDEPVMIRHSCKRTCILFATL 262
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -1
Query: 672 VEQAAMYIMFITGAVXVITTIYILSFKVMFKNFEKNKDAWLEKAKLNDGVYAPCEIPLS 496
+E +Y+ + G+V + +I KVM F +NK + + L A IP+S
Sbjct: 354 IENGLVYMGILVGSVLTVAFYFIYLRKVMIPKFVENKGKFPAEEILIISFPAAFFIPIS 412
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 291 YLEVIEDGELEGCDVSLGGSQRMRNLKDLDERNNELSLHI 172
Y+E ED +LE L + +L++LDE NN LH+
Sbjct: 68 YIEEEEDPDLEAYLSDLEREELEHSLEELDEENN-YKLHL 106
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/95 (25%), Positives = 39/95 (41%)
Frame = -1
Query: 747 GSXSDVRASTFTGPRFQLYLNILPIVEQAAMYIMFITGAVXVITTIYILSFKVMFKNFEK 568
G+ D STF F+ + I ++ A Y + YI+S V N
Sbjct: 88 GTQFDHMISTFPESAFRAGMRIAKYIDPAVYYDKYARSP-------YIMSPFVACVN--- 137
Query: 567 NKDAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLN 463
AW ++L D V + E ESD++ + ++N
Sbjct: 138 TLSAWPAPSRLEDAVISLVEADSQESDTESLPEIN 172
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 26.2 bits (55), Expect = 5.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = -1
Query: 372 KPSLKDSSQT-SKAYEIINQTDSD----EDFKYLEVIEDGE-LEGCDVSLGGSQRMRNLK 211
K L ++T S Y+ N T S +D + E I E +EG + ++R++NL
Sbjct: 383 KTRLTSKNKTVSNVYDESNATISSGVMQKDLRKTEEIGSAEAMEGEEQEPSLAERLQNLT 442
Query: 210 DLDERNNELSLHIS 169
LD++ LS IS
Sbjct: 443 KLDQQAQALSTQIS 456
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -1
Query: 438 ETVNSVKDKLTEMAHVKSLFDRKPSLKDSSQTSKAYEIINQTDSDEDFKYLEVIEDGEL 262
ET N + + ++ ++ DRK SL+ + + + N+ D+D + E +E+ L
Sbjct: 102 ETANKLSRVSSLVSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGL 160
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 675 IVEQAAMYIMFITGAVXVITTIYILSFKVMFKNF 574
I+E +Y+ + GA+ + ++ +KVM F
Sbjct: 353 IIENGLVYLGILVGALITLACYFVFLYKVMIPAF 386
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 25.8 bits (54), Expect = 7.2
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = -1
Query: 657 MYIMFITGAVXVITTIYILSFKVMFKNFEKNKDAWLEKAKLNDGVYAPCEIPLSESDSDE 478
+Y ++ V +I +++ + V ++ WL+K + DGV P S +DE
Sbjct: 413 VYWLYPIAFVLIILGLFV--YHVFVDATRESIKPWLKKGQGVDGVGTVRRPPSLVSSNDE 470
Query: 477 MIKLNIKLNDRLYETVNSVKDKLTE-MAHVKSLFDRK 370
LN K + + N VK+++ + VK++F RK
Sbjct: 471 ---LNKKNDIVVAHHDNEVKERIYDAYLSVKNVFVRK 504
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 432 VNSVKDKLTEMAHVKSLFDRKPSLKD--SSQTSKAYEI 325
V + DK+ A SL+DR PS KD SS+ + +Y +
Sbjct: 266 VQTTSDKVNASA---SLYDRSPSKKDITSSRNTSSYNL 300
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 9.5
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = -1
Query: 444 LYETVNSVKDKLTEMA-HVKSLFDRKPSLKDSSQTSKAYEIINQTDSDEDFKYLEVIEDG 268
L + N K K E + KSL+ LKDS +T K + +T K E
Sbjct: 138 LKKKCNVYKSKFEESSLRCKSLYSSNTKLKDSMETMKR-RMETETKEMNKIKPKNDSESD 196
Query: 267 ELEGCDVSLGGSQRMRNLKDLDERNNELSLHISD 166
+ SL + ++ D N+ L+I++
Sbjct: 197 RFKRNSQSLSQQSPLLDVHSPDNSNHRTMLNINN 230
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 702 FQLYLNILPIVEQAAMYIMFITGAVXVITTIYILSFKVMFKNFEKNKDAWLE 547
+QL + +E ++M + IT +T IY + ++F +FE AW E
Sbjct: 549 YQLEFREMSTMEGSSMKVAKIT-----LTYIYAIKLALLFNDFEFGYAAWQE 595
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,636,150
Number of Sequences: 5004
Number of extensions: 46185
Number of successful extensions: 190
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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