Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_O19
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0297 - 7051592-7052469,7053197-7053302,7053396-7053471,705... 34 0.15
08_01_0535 - 4638954-4639127,4639894-4639944,4640287-4640352,464... 32 0.47
09_04_0430 + 17502387-17503505 32 0.62
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 31 0.82
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 31 1.1
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 31 1.4
12_02_1256 - 27366282-27368021 30 2.5
12_02_0672 - 21726416-21726664,21727654-21727744,21727914-217279... 30 2.5
09_06_0237 + 21788886-21789965 30 2.5
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 30 2.5
12_01_0023 - 173691-174119 29 3.3
01_06_1170 + 35087705-35088211 29 3.3
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 29 3.3
11_07_0002 - 27171791-27172222 29 4.4
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 29 4.4
09_02_0279 + 6702517-6702948 29 4.4
06_03_0344 - 19754868-19754980,19756085-19756162,19756241-19756619 29 4.4
05_05_0377 - 24498664-24500215,24500306-24500643 29 4.4
11_06_0610 - 25449085-25453284 29 5.8
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 5.8
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 28 7.6
07_03_0766 - 21354494-21354772,21355094-21355247,21355340-213555... 28 7.6
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 28 7.6
>09_02_0297 -
7051592-7052469,7053197-7053302,7053396-7053471,
7053581-7053648
Length = 375
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = -2
Query: 302 RGRSRAKSLLRPPARRRRIGAERDELSLSRSATSCCEMVYSQKSSIAFQDSSTDCRTSDC 123
+G + A LR PARR +S++R+A CC V+ + +S DC++S C
Sbjct: 98 QGNTNAFRELRCPARREGSYGGHTSISINRAA--CCSCVFFESTSSRRSCFRLDCKSS-C 154
Query: 122 RASWLRQSAATSPV 81
R+ SP+
Sbjct: 155 RSDEQENQIMRSPL 168
>08_01_0535 -
4638954-4639127,4639894-4639944,4640287-4640352,
4640492-4640557,4640701-4640892,4641282-4641780,
4642009-4642364
Length = 467
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 201 GGGGTREGELIPLRTYPSPPSRGPEKGFCSTTAPVDGGFPPVKVKGRLEGVEAARHATGT 380
GGGG + + P+P + G+ + VDGG G A+ + G+
Sbjct: 20 GGGGDWWSAAVSSCSAPAPETMQGFGGWSAAVVAVDGG---GNTSRSAAGNTASSESPGS 76
Query: 381 LARC*GVTKERPVGGVSRP 437
LA +T + P GGV+ P
Sbjct: 77 LATGSSITFQEPAGGVADP 95
>09_04_0430 + 17502387-17503505
Length = 372
Score = 31.9 bits (69), Expect = 0.62
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -3
Query: 466 PLDQNQPAGSGRDTPPTGRSFVTP*QRARVPVACRAASTPSSRPLTFTGGKPPSTGAVVE 287
P+ Q QP + TPP TP RA P + + P S P +PP+T A
Sbjct: 162 PMQQPQPQPPPQPTPPRAAPLPTP-PRA-PPQSTPPRAAPQSTPPQRVAPQPPATAAAPP 219
Query: 286 QNPFSGP 266
P + P
Sbjct: 220 IEPVAPP 226
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 31.5 bits (68), Expect = 0.82
Identities = 28/104 (26%), Positives = 47/104 (45%)
Frame = -3
Query: 607 TTRQXGSPQGRPADGAFETNRRL*NVGRLGTAVRQAAQTVPLVSRNTPLDQNQPAGSGRD 428
+ R G+P G + GA +N + + + + Q P+ S +T +QP S +
Sbjct: 1315 SARATGAPAGVASPGASPSNLIV-----MKSGLHQQQAKAPMQSLST--SNHQPQSSSKM 1367
Query: 427 TPPTGRSFVTP*QRARVPVACRAASTPSSRPLTFTGGKPPSTGA 296
P T S +R A A+ +PS+ TGG PP++G+
Sbjct: 1368 GPVTNMS-TGGGDLSRSSNAPVASGSPSNSVSKSTGGSPPASGS 1410
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 466 PLD-QNQPAGSGRDTP-PTGRSFVTP*QRARVPVACRAASTPSSRPLTFTGGKPPSTGAV 293
PLD + PA RD P F+ P RAR P A +++ SS P +F +PP T
Sbjct: 2 PLDPDSSPAPPHRDWFFPPAPPFL-PSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRS 60
Query: 292 VEQNPFSGP 266
++P P
Sbjct: 61 RSRSPLPPP 69
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = -3
Query: 517 TAVRQAAQTVPLVSRNTPLDQNQPAGSGRDTPPTGRSFVTP*QRARVPVACRAASTPSSR 338
TA+ + T + PL S R P G +TP +R+ P + R ++T S
Sbjct: 114 TALTRTRSTNSSSRCSPPLSLQSSTPSRRSPTPPGNKTLTPPRRSPSPASRRMSATSSGP 173
Query: 337 PLTFTGGKPP 308
L T G P
Sbjct: 174 TLNGTRGASP 183
>12_02_1256 - 27366282-27368021
Length = 579
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 282 FCSTTAPVDGGFPPVKVKGRLEGVEAARHATGTLA 386
FC T +PV V+V GR+ EAAR G A
Sbjct: 474 FCGTASPVGSYILNVRVAGRMYDREAARQGHGVAA 508
>12_02_0672 -
21726416-21726664,21727654-21727744,21727914-21727981,
21728684-21728809,21728893-21729113,21729876-21729903
Length = 260
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 287 AKSLLRPPARRRRIGAERDELSLSRSATSCCEM 189
A SLLRPP+ R R + +RS TSCC M
Sbjct: 169 ANSLLRPPSMRVRDYRSEQQQGAARS-TSCCAM 200
>09_06_0237 + 21788886-21789965
Length = 359
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 162 GDARLLRVHHLAAGGGGTREGELIPLRTYPSPPSRGPEKGFCSTTAPV 305
G + + L GGGG ++P+ P PP GP +C APV
Sbjct: 135 GRSNFAVMRRLPDGGGGGGGWRVVPV---PEPPLGGPGDYYCRKPAPV 179
>04_04_1354 -
32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = -2
Query: 428 YTANRSLFRNSLAAR*SAGSVPRGLYPLKSPLDLHRGEATIYRGRSRAKSLLRPPA--RR 255
YT + F NS+ S +V G + S D H+GE + G + S+L
Sbjct: 15 YTPRKRKFLNSVHYSESNRAVSHGSGLVTSAKDSHQGEESFLNGPAGLSSILSNSQGFAP 74
Query: 254 RRIGAERDELSLSRSATSCCEMVYSQKSSIAFQDSSTDCR 135
+ I + ELS R TS C+ + +I+ + +++C+
Sbjct: 75 QDILSGTTELSGIRCTTSSCKPNETILHTISTNNGTSNCQ 114
>12_01_0023 - 173691-174119
Length = 142
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 270 PEKGFCSTTAPVDGGFPPVKVKGRLEGVEAARHATGTL 383
P +G S A G P + ++GR EG RHA G+L
Sbjct: 101 PRRG--SQDAEHGGNLPALGLEGRREGARGGRHARGSL 136
>01_06_1170 + 35087705-35088211
Length = 168
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 123 AVRCPAVRR*VLEGDARLLRVHHLA-AGGGGTREGELIPLRTYPSPPSRGPEKGFCSTTA 299
A R PA R +LE RLL + A GGG R GE P+PP R + +TT+
Sbjct: 107 AGRAPARRSWLLEALKRLLCWLGIGGAWGGGRRRGEEPAAPCPPAPPPRMQLLDYLTTTS 166
>01_06_0293 -
28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 228 LIPLRTYPSPPSRGPEKGFCSTTAPVDGGFPPVK-VKGRLEGVEAARHA 371
L L + PSP S P S +PV PP + G V+A RHA
Sbjct: 22 LSSLASLPSPHSEPPSASAASPLSPVPASVPPTALIPGSRFLVDAFRHA 70
>11_07_0002 - 27171791-27172222
Length = 143
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 445 QAGSGPAGYSGTPAALSGRPDG 510
+AGS PAG G+PA G P G
Sbjct: 65 RAGSTPAGVRGSPAGAGGSPGG 86
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 302 RGRSRAKSLLRPPARRRRIGAERDEL 225
RGR R+++ PPA+RRR+ +E+
Sbjct: 73 RGRGRSRAAPSPPAKRRRVEEPEEEV 98
>09_02_0279 + 6702517-6702948
Length = 143
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 445 QAGSGPAGYSGTPAALSGRPDG 510
+AGS PAG G+PA G P G
Sbjct: 65 RAGSTPAGVRGSPAGAGGSPGG 86
>06_03_0344 - 19754868-19754980,19756085-19756162,19756241-19756619
Length = 189
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -3
Query: 457 QNQPAGSGRDTP-----PTGRSFVTP*QRARVPVACRAASTPSSRPLTFTGGKPPSTGAV 293
+N P G RDTP P RS ++P + + + R STP SRP+ + PP +
Sbjct: 18 KNSPPGD-RDTPTPGSRPVDRSDLSPPKNSSL--GDRDTSTPGSRPVDHSDLSPPKNSSS 74
Query: 292 VEQN-PFSGPR 263
+++ P G R
Sbjct: 75 GDRDTPTPGSR 85
>05_05_0377 - 24498664-24500215,24500306-24500643
Length = 629
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = +1
Query: 28 WTLESPSGATPCP-------CLANRTGL--VAADCRSHDAR--QSDVRQSVDESWKAMLD 174
W L SP+G TP P CLA GL V CR+ D ++R D ++ ++D
Sbjct: 500 WELRSPAGGTPVPASVFEDCCLAVEEGLNSVYRQCRAADRSIGPLEIRVVADGTFDKLMD 559
Query: 175 F 177
+
Sbjct: 560 Y 560
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = -1
Query: 678 TPDXXSPSEVRT--PDEVRGLPRSTXQ-PDXAAHPKDAQPTELSRRIEGSET*AVSVRQS 508
TP+ +PS ++ P+E P S + P AHP P+E S E+ + +S
Sbjct: 762 TPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKS 821
Query: 507 VRPPRQCRWCPGIPRWTRTSLPGRDA 430
PP P P ++S P +A
Sbjct: 822 PSPPSGHEGTPPSP--VKSSSPPPEA 845
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 445 QAGSGPAGYSGTPAALSGRPDGLPYRDG 528
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 195 AAGGGGTREGELIPLRTYPSPPS 263
A GGGG + +P R PSPPS
Sbjct: 119 AGGGGGGGGADALPWRHRPSPPS 141
>07_03_0766 -
21354494-21354772,21355094-21355247,21355340-21355577,
21355659-21355866,21356148-21356275,21356384-21356521,
21357234-21358080
Length = 663
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 110 LRQSAATSPVLFARQGHGVAPEGL 39
L+Q+A+TSP LFA G AP+ +
Sbjct: 56 LQQNASTSPTLFAAGALGAAPDAV 79
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 76 NRTGLVAADCRSHDARQSDVRQSVDESWK 162
N TG+V AD +S A + + R VD+ W+
Sbjct: 405 NITGIVKADDQSQLAEKEEARAKVDKVWR 433
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,461,173
Number of Sequences: 37544
Number of extensions: 565440
Number of successful extensions: 2196
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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