Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_O17
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052234-1|AAH52234.1| 417|Homo sapiens wingless-type MMTV inte... 35 0.38
BC034352-1|AAH34352.1| 379|Homo sapiens WNT10A protein protein. 35 0.38
AY009400-1|AAG38660.1| 417|Homo sapiens WNT10a precursor protein. 35 0.38
AK024363-1|BAB14898.1| 417|Homo sapiens protein ( Homo sapiens ... 35 0.38
AF315943-2|AAG45153.1| 417|Homo sapiens WNT10A protein. 35 0.38
AC073128-2|AAY24175.1| 417|Homo sapiens unknown protein. 35 0.38
AB059569-1|BAB55602.1| 417|Homo sapiens WNT10A protein. 35 0.38
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 33 1.2
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 33 1.2
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 33 1.2
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 33 1.2
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 33 1.2
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 32 2.0
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 32 2.0
X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for ... 32 2.0
M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein. 32 2.0
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 32 2.0
BC104235-1|AAI04236.1| 116|Homo sapiens NPFF protein protein. 32 2.0
BC104234-1|AAI04235.1| 116|Homo sapiens NPFF protein protein. 32 2.0
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 32 2.0
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 32 2.0
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 32 2.0
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 32 2.0
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 32 2.0
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 32 2.0
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 32 2.0
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 32 2.0
AF005271-1|AAB64288.1| 113|Homo sapiens FMRFamide-related prepr... 32 2.0
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 32 2.0
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 32 2.7
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 32 2.7
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 32 2.7
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 32 2.7
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 32 2.7
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 32 2.7
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 32 2.7
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 32 2.7
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 32 2.7
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 32 2.7
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 32 2.7
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 32 2.7
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 32 2.7
AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein pr... 31 4.7
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p... 31 4.7
BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family me... 31 6.1
AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with... 31 6.1
AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with... 31 6.1
AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger re... 31 6.1
AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1 pr... 31 6.1
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 30 8.1
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 30 8.1
>BC052234-1|AAH52234.1| 417|Homo sapiens wingless-type MMTV
integration site family, member 10A protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>BC034352-1|AAH34352.1| 379|Homo sapiens WNT10A protein protein.
Length = 379
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>AY009400-1|AAG38660.1| 417|Homo sapiens WNT10a precursor protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>AK024363-1|BAB14898.1| 417|Homo sapiens protein ( Homo sapiens
cDNA FLJ14301 fis, clone PLACE1011896, highly similar to
Mus musculus Wnt10a mRNA. ).
Length = 417
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>AF315943-2|AAG45153.1| 417|Homo sapiens WNT10A protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>AC073128-2|AAY24175.1| 417|Homo sapiens unknown protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>AB059569-1|BAB55602.1| 417|Homo sapiens WNT10A protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 294 RRPTTSVSAVRGAYXAXRAMPLVFRDTRWGXNNLXGRNAIHGERVAFHNXF 446
R P + SA++G A FRD RW ++L RN I E F F
Sbjct: 77 RHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGF 127
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/94 (30%), Positives = 36/94 (38%)
Frame = +3
Query: 21 RGPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
+GP + GP+ GARG Q G P A G GPP PG P G +
Sbjct: 806 QGPTGVTGPK--GARGA---QGPPGATGFPGAAGRVGPPGSNG----NPGPPGPPGPSGK 856
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
G+RG + P P P G G+ P
Sbjct: 857 DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 890
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/94 (30%), Positives = 36/94 (38%)
Frame = +3
Query: 21 RGPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
+GP + GP+ GARG Q G P A G GPP PG P G +
Sbjct: 806 QGPTGVTGPK--GARGA---QGPPGATGFPGAAGRVGPPGSNG----NPGPPGPPGPSGK 856
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
G+RG + P P P G G+ P
Sbjct: 857 DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 890
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/94 (30%), Positives = 36/94 (38%)
Frame = +3
Query: 21 RGPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
+GP + GP+ GARG Q G P A G GPP PG P G +
Sbjct: 375 QGPTGVTGPK--GARGA---QGPPGATGFPGAAGRVGPPGSNG----NPGPPGPPGPSGK 425
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
G+RG + P P P G G+ P
Sbjct: 426 DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 459
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/94 (30%), Positives = 36/94 (38%)
Frame = +3
Query: 21 RGPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
+GP + GP+ GARG Q G P A G GPP PG P G +
Sbjct: 875 QGPTGVTGPK--GARGA---QGPPGATGFPGAAGRVGPPGSNG----NPGPPGPPGPSGK 925
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
G+RG + P P P G G+ P
Sbjct: 926 DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 959
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 33.1 bits (72), Expect = 1.2
Identities = 29/94 (30%), Positives = 36/94 (38%)
Frame = +3
Query: 21 RGPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
+GP + GP+ GARG Q G P A G GPP PG P G +
Sbjct: 875 QGPTGVTGPK--GARGA---QGPPGATGFPGAAGRVGPPGSNG----NPGPPGPPGPSGK 925
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
G+RG + P P P G G+ P
Sbjct: 926 DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 959
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 360
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 361 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 365 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 423
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 424 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 450
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 360
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 361 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 365 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 423
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 424 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 450
>X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for
alpha-1(I) chain of procollagen type I. ).
Length = 472
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 360
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 361 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 365 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 423
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 424 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 450
>M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein.
Length = 472
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 360
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 361 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 365 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 423
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 424 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 450
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1069 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1128
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1129 GQPGEPGPPGPKGPTGDDGPKGNP 1152
>BC104235-1|AAI04236.1| 116|Homo sapiens NPFF protein protein.
Length = 116
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 391 LFXPQRVSRNTSGIARXAW*APRTAE 314
LF PQR RNT G R W +PR E
Sbjct: 73 LFQPQRFGRNTQGSWRNEWLSPRAGE 98
>BC104234-1|AAI04235.1| 116|Homo sapiens NPFF protein protein.
Length = 116
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 391 LFXPQRVSRNTSGIARXAW*APRTAE 314
LF PQR RNT G R W +PR E
Sbjct: 73 LFQPQRFGRNTQGSWRNEWLSPRAGE 98
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 360
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 361 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 365 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 423
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 424 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 450
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1097 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1156
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNP 1180
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1097 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1156
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNP 1180
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1097 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1156
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNP 1180
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1097 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1156
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNP 1180
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1183 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1242
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1243 GQPGEPGPPGPKGPTGDDGPKGNP 1266
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP-TKRLPCTL-TPGVRSPSGVKTRSE*GGSRGST 230
G RG + G + P G GPP K P +PG++ GVK G +G +
Sbjct: 1097 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1156
Query: 231 LQPDTRRHPEDARPTGRRGDSRRP 302
QP P PTG G P
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNP 1180
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 299 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 357
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 358 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 385
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 362 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 420
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 421 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 447
>AF005271-1|AAB64288.1| 113|Homo sapiens FMRFamide-related
prepropeptide protein.
Length = 113
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 391 LFXPQRVSRNTSGIARXAW*APRTAE 314
LF PQR RNT G R W +PR E
Sbjct: 70 LFQPQRFGRNTQGSWRNEWLSPRAGE 95
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 32.3 bits (70), Expect = 2.0
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 42 GPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRSE*GGS 218
GPR G RG AG A G GPP P PG G K + G
Sbjct: 305 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG-PPGFPGAVGAKGEAGPQGP 363
Query: 219 RGSTLQPDTRRHPEDARPTGRRGDSRRP 302
RGS R P P G G + P
Sbjct: 364 RGSEGPQGVRGEPGPPGPAGAAGPAGNP 391
Score = 31.1 bits (67), Expect = 4.7
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 GPNLLRG-PRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTR 200
GP +RG P G G + G + +P A+G G P PG R PSG +
Sbjct: 368 GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA-GAPGFPGARGPSGPQGP 426
Query: 201 SE*GGSRGSTLQPDTRRHPEDARPTGRRGD 290
G +G++ +P P TG +G+
Sbjct: 427 GGPPGPKGNSGEPGA---PGSKGDTGAKGE 453
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 613 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 671
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 672 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 614 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 672
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 673 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 614 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 672
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 673 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 609 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 667
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 668 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 695
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 613 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 671
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 672 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 614 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 672
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 673 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 613 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 671
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 672 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 614 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 672
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 673 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 613 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 671
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 672 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 614 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 672
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 673 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 613 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 671
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 672 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 614 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 672
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 673 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/88 (30%), Positives = 32/88 (36%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP L G G G G + P QG+ G LPC + PG PSG
Sbjct: 613 GPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCII-PGSYGPSGFPGTP 671
Query: 204 E*GGSRGSTLQPDTRRHPEDARPTGRRG 287
G +GS P T P + G G
Sbjct: 672 GFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
>AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein
protein.
Length = 417
Score = 31.1 bits (67), Expect = 4.7
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 21 RGPNLLRGPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLT--PGVRSPSGV 191
+GP RGPR G++G + G + G GP +R P PG R G
Sbjct: 117 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGS 176
Query: 192 KTRSE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
K GSRGS +P + D P G G P
Sbjct: 177 KGSQGPKGSRGSPGKPGPQGSSGDPGPPGPPGKEGLP 213
>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
protein.
Length = 1125
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Frame = +3
Query: 24 GPNLLRGPRA*GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLTPGVRSPSGVKTRS 203
GP RGP G +G S G+ +P G G K+ L PG R P G +
Sbjct: 487 GPTGPRGPVGIGVQGPKGEPGSIGLPGQPGVPGEDGAAGKKGEAGL-PGARGPEGPPGKG 545
Query: 204 E*G-----GSRGSTLQPDTRRHPEDARPTGRRG 287
+ G G +GS R P P G G
Sbjct: 546 QPGPKGDEGKKGSKGNQGQRGLPGPEGPKGEPG 578
>BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family
member 12 protein.
Length = 742
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 21 RGPNLLRGPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLT--PGVRSPSGV 191
+GP RGPR G++G + G + G GP +R P PG R G
Sbjct: 442 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGS 501
Query: 192 KTRSE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
K GSRGS +P + D P G G P
Sbjct: 502 KGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLP 538
>AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with
C-type lectin type II protein.
Length = 622
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 21 RGPNLLRGPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLT--PGVRSPSGV 191
+GP RGPR G++G + G + G GP +R P PG R G
Sbjct: 442 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGS 501
Query: 192 KTRSE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
K GSRGS +P + D P G G P
Sbjct: 502 KGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLP 538
>AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with
C-type lectin type I protein.
Length = 742
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 21 RGPNLLRGPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLT--PGVRSPSGV 191
+GP RGPR G++G + G + G GP +R P PG R G
Sbjct: 442 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGS 501
Query: 192 KTRSE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
K GSRGS +P + D P G G P
Sbjct: 502 KGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLP 538
>AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger
receptor 2 protein.
Length = 742
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 21 RGPNLLRGPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLT--PGVRSPSGV 191
+GP RGPR G++G + G + G GP +R P PG R G
Sbjct: 442 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGS 501
Query: 192 KTRSE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
K GSRGS +P + D P G G P
Sbjct: 502 KGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLP 538
>AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1
protein.
Length = 742
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 21 RGPNLLRGPRA*-GARGVCETQRSAGVESRPRAQGI*GPPTKRLPCTLT--PGVRSPSGV 191
+GP RGPR G++G + G + G GP +R P PG R G
Sbjct: 442 QGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGS 501
Query: 192 KTRSE*GGSRGSTLQPDTRRHPEDARPTGRRGDSRRP 302
K GSRGS +P + D P G G P
Sbjct: 502 KGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLP 538
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.3 bits (65), Expect = 8.1
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP--TKRLPCTLTPGVRSPSGVKTRSE*GGSRGST 230
G GV S G + P G GPP + PG R PSG R G +G+
Sbjct: 1271 GDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAK 1330
Query: 231 LQPDTRRHPEDARPTGRRGDSRR 299
+P P P G RG R
Sbjct: 1331 GEPGPDGPPGRTGPMGARGPPGR 1353
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.3 bits (65), Expect = 8.1
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +3
Query: 57 GARGVCETQRSAGVESRPRAQGI*GPP--TKRLPCTLTPGVRSPSGVKTRSE*GGSRGST 230
G GV S G + P G GPP + PG R PSG R G +G+
Sbjct: 1184 GDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAK 1243
Query: 231 LQPDTRRHPEDARPTGRRGDSRR 299
+P P P G RG R
Sbjct: 1244 GEPGPDGPPGRTGPMGARGPPGR 1266
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,033,104
Number of Sequences: 237096
Number of extensions: 2066056
Number of successful extensions: 9333
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 8146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9291
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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