Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_O08
(822 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 33 0.36
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 31 0.84
07_03_0846 - 21983581-21986055 30 1.9
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 30 1.9
05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581 29 3.4
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 29 4.5
03_05_0183 - 21681673-21682524 29 4.5
02_01_0444 + 3212646-3212686,3213093-3213225,3213467-3213570,321... 29 4.5
01_06_0778 - 31920956-31921502,31921639-31921771,31922287-319223... 29 4.5
07_03_1086 + 23858419-23859423,23859527-23859610 29 5.9
07_03_0414 + 17892133-17893590 28 7.8
06_01_0130 - 1010901-1011932,1012627-1012913,1013516-1013606 28 7.8
04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680 28 7.8
01_06_0695 - 31292622-31293317 28 7.8
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 92 PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 220
PS TP ER S+D PR Y R+RD K+ S D
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/85 (27%), Positives = 30/85 (35%)
Frame = +2
Query: 65 NRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGPR 244
+RS+ A R +S D P HR P R R K D R P+ P
Sbjct: 501 SRSRSPAEHQRRDVRNRLRSGRDGGGPDHRNSSPPVNRGRSRSRSKSRDPSKSRSPDAPA 560
Query: 245 RRVSRFECETRLVKSHCLEPPDSRG 319
++ S R S P S+G
Sbjct: 561 KKGSSKYNRRRSSSSRSSSPAGSKG 585
>07_03_0846 - 21983581-21986055
Length = 824
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 218 DLRDPNGPRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASA 367
DL+D G +R +C+T S PD S VS+ LPD+A+ A A
Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373
>06_03_1055 -
27234824-27234838,27236087-27236125,27236322-27237388,
27237422-27237630,27237650-27238053
Length = 577
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 360 ASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRGPFGS 226
A+ A +GK + E E S+QCD T + +S RE ++R P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473
>05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581
Length = 311
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 447 GHLVHALGR-AAGGAKLPSAGLCLNASKAEASLA 349
G LV L R GG SAG+C S+ +ASLA
Sbjct: 203 GRLVETLARDGGGGGGAYSAGVCFYGSRMDASLA 236
>08_02_0104 +
12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 26 LSSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 205
+S +SPG L R HD +L KSST + R E SR +K
Sbjct: 730 VSEADSPGDSL---RDVHDISLNLKLSLDSEKSSTKENSVRRNLEDAVQKLSRGVSANRK 786
Query: 206 TDSID 220
T+S++
Sbjct: 787 TESVE 791
>03_05_0183 - 21681673-21682524
Length = 283
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 659 SQAFIATLLFDPSMSALPIIAKQNSPS 579
SQAF A LL D + +A+P++ Q P+
Sbjct: 229 SQAFSAVLLADANRAAIPVVVVQKRPA 255
>02_01_0444 +
3212646-3212686,3213093-3213225,3213467-3213570,
3214360-3214504,3214592-3214732,3214835-3216298
Length = 675
Score = 29.1 bits (62), Expect = 4.5
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = +2
Query: 62 LNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLR-DPNG 238
++R +H S TPR D R E+ P + V +DS +L P
Sbjct: 581 IDREEHKTRTKSRTPRPRADQPADGVGERSNREVAPQ-HPPERTVSLPSDSGNLGVKPKA 639
Query: 239 PRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFR 382
P R +S ++P SRG V S+PD LA+ + A R
Sbjct: 640 PARSIS-------------MQPDKSRG-IVHPSMPDFDELAARISALR 673
>01_06_0778 -
31920956-31921502,31921639-31921771,31922287-31922374,
31922857-31923198
Length = 369
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 167 PDLRSRDARVKKKTDSIDLRDPNGPRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPD 346
P + + D V + + L P GPRR +C ++K ++P D G +S S+P
Sbjct: 226 PLVSTGDVEVGEVSYKYSLLRPRGPRRMSCSVQCP--VLKGTAVDPQD--GKRLSNSIPS 281
Query: 347 SARLASALEAFRHN 388
S L S + ++ +
Sbjct: 282 SLVLNSKVPSWHEH 295
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -1
Query: 507 LLMACRCDSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNA-----SKAEASLAES 343
LL CD N A + LVHAL AA A +A L A AS+ +
Sbjct: 129 LLNLSICDENKAIIVEAGAIRPLVHALKSAASPAARENAACALLRLSQLDGSAAASIGRA 188
Query: 342 GKDMLTVEPRESGGSK 295
G L V E+GG++
Sbjct: 189 GAIPLLVSLLETGGAR 204
>07_03_0414 + 17892133-17893590
Length = 485
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 439 QMSETAVPLVLSSITIATTSHQ*GKTNLSHDGLIPAHVPF*WVNNPTL-GEFCFAMIGRA 615
Q + V + L S+T+ + T H GL+ A PF WV P + G A + A
Sbjct: 279 QADGSVVYVSLGSLTVISLEQF---TEFLH-GLVAAGYPFLWVLRPDMVGASQSAALREA 334
Query: 616 DIEGSKSNVAMNAWLPQ 666
KS + W PQ
Sbjct: 335 VAAAGKSKARVVEWAPQ 351
>06_01_0130 - 1010901-1011932,1012627-1012913,1013516-1013606
Length = 469
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2
Query: 236 GPRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 394
GP VS+ V SHC PP RG ++ +P A L NPA
Sbjct: 268 GPESLVSQTAATYGRVFSHCFPPPTRRG-FFTLGVPRVAAWRYVLTPMLKNPA 319
>04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680
Length = 628
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 26 LSSDESPGAGLSLNRSQHDAALPSTT---PRQERKSSTDYSEPRHRTELYPDLRSRDARV 196
LSS E+ GA +R A PS + P ++R D RT+ S + +
Sbjct: 412 LSSTETDGARNEDSRLDSTEASPSRSYVQPSEDRNDQVDNFVYGIRTDAAHGTSSGTSPL 471
Query: 197 KKKTDSIDLRDPNGPR 244
KT+ ID + N P+
Sbjct: 472 TGKTEPIDAKSENDPK 487
>01_06_0695 - 31292622-31293317
Length = 231
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +2
Query: 44 PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 178
P L Q D PS++ SST S P HR L P R
Sbjct: 3 PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,826,401
Number of Sequences: 37544
Number of extensions: 459022
Number of successful extensions: 1346
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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