Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_O03
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   307   1e-83
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   307   1e-83
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   307   1e-83
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   307   1e-83
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   307   1e-83
AY089513-1|AAL90251.1|  816|Drosophila melanogaster GH22266p pro...    29   9.9  
AE014296-152|AAF47427.1|  816|Drosophila melanogaster CG13907-PA...    29   9.9  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  307 bits (754), Expect = 1e-83
 Identities = 153/230 (66%), Positives = 170/230 (73%)
 Frame = -1

Query: 783 VKQGQKKAHIMXSNLTXVPSRTK*NGPREHXENLSLSILCLPKMK*LTALVSPRAKDTKV 604
           +KQ QKKAH+M   L       K    REH E          + + +  +   + K  K 
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 241

Query: 603 SLLVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 424
                  +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 242 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 301

Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 302 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 361

Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 362 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  307 bits (754), Expect = 1e-83
 Identities = 153/230 (66%), Positives = 170/230 (73%)
 Frame = -1

Query: 783 VKQGQKKAHIMXSNLTXVPSRTK*NGPREHXENLSLSILCLPKMK*LTALVSPRAKDTKV 604
           +KQ QKKAH+M   L       K    REH E          + + +  +   + K  K 
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230

Query: 603 SLLVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 424
                  +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290

Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 350

Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 351 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  307 bits (754), Expect = 1e-83
 Identities = 153/230 (66%), Positives = 170/230 (73%)
 Frame = -1

Query: 783 VKQGQKKAHIMXSNLTXVPSRTK*NGPREHXENLSLSILCLPKMK*LTALVSPRAKDTKV 604
           +KQ QKKAH+M   L       K    REH E          + + +  +   + K  K 
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217

Query: 603 SLLVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 424
                  +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 218 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277

Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 337

Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 338 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  307 bits (754), Expect = 1e-83
 Identities = 153/230 (66%), Positives = 170/230 (73%)
 Frame = -1

Query: 783 VKQGQKKAHIMXSNLTXVPSRTK*NGPREHXENLSLSILCLPKMK*LTALVSPRAKDTKV 604
           +KQ QKKAH+M   L       K    REH E          + + +  +   + K  K 
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217

Query: 603 SLLVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 424
                  +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 218 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277

Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 337

Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 338 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  307 bits (754), Expect = 1e-83
 Identities = 153/230 (66%), Positives = 170/230 (73%)
 Frame = -1

Query: 783 VKQGQKKAHIMXSNLTXVPSRTK*NGPREHXENLSLSILCLPKMK*LTALVSPRAKDTKV 604
           +KQ QKKAH+M   L       K    REH E          + + +  +   + K  K 
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230

Query: 603 SLLVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 424
                  +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290

Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 350

Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 351 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>AY089513-1|AAL90251.1|  816|Drosophila melanogaster GH22266p
           protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 775 GTKEGSHYXIQLNGGTIEDKVK 710
           G+  GSH+ +QL  GTIE K+K
Sbjct: 282 GSFAGSHFMVQLPDGTIERKLK 303


>AE014296-152|AAF47427.1|  816|Drosophila melanogaster CG13907-PA
           protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 775 GTKEGSHYXIQLNGGTIEDKVK 710
           G+  GSH+ +QL  GTIE K+K
Sbjct: 282 GSFAGSHFMVQLPDGTIERKLK 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,583,900
Number of Sequences: 53049
Number of extensions: 782876
Number of successful extensions: 2080
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)