Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_N17
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.012
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.012
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.012
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.20
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 31 1.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 1.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.9
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 30 1.9
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.3
AC025726-31|AAK73929.1| 178|Caenorhabditis elegans Hypothetical... 29 3.3
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 4.3
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.3
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 4.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 5.7
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 5.7
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 5.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.7
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 7.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 10.0
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 10.0
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 10.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXX---GGGXXXXXXXXKXPPPGGXXXPP 588
G PPPP PPP GG GG PPP G PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 589 PPPPP 603
PPPPP
Sbjct: 772 PPPPP 776
Score = 32.3 bits (70), Expect(2) = 0.019
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPPGG PPPPPP
Sbjct: 775 PPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 642 PPPPPPXKXXKKXPPP 689
PPPPPP K PPP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 23.4 bits (48), Expect(2) = 0.019
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGG 486
G PPPP PPP GG
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXX---GGGXXXXXXXXKXPPPGGXXXPP 588
G PPPP PPP GG GG PPP G PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 589 PPPPP 603
PPPPP
Sbjct: 772 PPPPP 776
Score = 32.3 bits (70), Expect(2) = 0.019
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPPGG PPPPPP
Sbjct: 775 PPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 642 PPPPPPXKXXKKXPPP 689
PPPPPP K PPP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 23.4 bits (48), Expect(2) = 0.019
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGG 486
G PPPP PPP GG
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXX---GGGXXXXXXXXKXPPPGGXXXPP 588
G PPPP PPP GG GG PPP G PP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 589 PPPPP 603
PPPPP
Sbjct: 355 PPPPP 359
Score = 32.3 bits (70), Expect(2) = 0.020
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPPGG PPPPPP
Sbjct: 358 PPPGGFKGGPPPPPP 372
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 642 PPPPPPXKXXKKXPPP 689
PPPPPP K PPP
Sbjct: 354 PPPPPPPGGFKGGPPP 369
Score = 23.4 bits (48), Expect(2) = 0.020
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGG 486
G PPPP PPP GG
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGG 362
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPPXXXXXXXXXXXXXXXXXXXKKXXKXXPPPXXKXXXXXXXXXXXXX 738
PPP G PPPPP K PPP +
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRR 188
Query: 739 PPPPXXG 759
PPPP G
Sbjct: 189 PPPPPKG 195
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPPXXXXXXXXXXXXXXXXXXXKKXXKXXPPPXXKXXXXXXXXXXXXX 738
PPP G PPPPP K PPP +
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRR 250
Query: 739 PPPPXXG 759
PPPP G
Sbjct: 251 PPPPPKG 257
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/76 (25%), Positives = 20/76 (26%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPPXXXXXXXXXXXXXXXXXXXKKXXKXXPPPXXKXXXXXXXXXXXXX 738
PPP G PPPPP K PPP +
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASR 94
Query: 739 PPPPXXGGXXXXXAPP 786
PPP G PP
Sbjct: 95 RPPPPPKGTGTPPPPP 110
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/78 (23%), Positives = 19/78 (24%)
Frame = +1
Query: 553 KXPPPGGXXXPPPPPPPXXXXXXXXXXXXXXXXXXXKKXXKXXPPPXXKXXXXXXXXXXX 732
+ PPP PPPPP K PPP
Sbjct: 126 RPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNA 185
Query: 733 XXPPPPXXGGXXXXXAPP 786
PPP G PP
Sbjct: 186 SRRPPPPPKGTGTPPPPP 203
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect(2) = 0.31
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = +1
Query: 559 PPP--GGXXXPPPPPPP 603
PPP GG PPPPPPP
Sbjct: 44 PPPCGGGYEAPPPPPPP 60
Score = 21.0 bits (42), Expect(2) = 0.31
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 424 PPPPXXXFFFXXXPPPXXGGGXE 492
PPPP PPP GGG E
Sbjct: 39 PPPP---------PPPPCGGGYE 52
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 289 PPPSSGMWPPPPPPP 303
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 290 PPSSGMWPPPPPPPP 304
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +1
Query: 424 PPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXP-PPGGXXXPPPPPP 600
PPPP + PPP + G G + P PP G PPPPP
Sbjct: 336 PPPPGMRYPGGMPPPPPPR---------YPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Query: 601 P 603
P
Sbjct: 387 P 387
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +1
Query: 424 PPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXPPPGGXXXPPPPPP 600
PPPP + PPP G G + PPG PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGP------PGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 299 PPPSSGMWPPPPPPP 313
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 300 PPSSGMWPPPPPPPP 314
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +1
Query: 424 PPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXP-PPGGXXXPPPPPP 600
PPPP + PPP + G G + P PP G PPPPP
Sbjct: 346 PPPPGMRYPGGMPPPPPPR---------YPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Query: 601 P 603
P
Sbjct: 397 P 397
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +1
Query: 424 PPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXPPPGGXXXPPPPPP 600
PPPP + PPP G G + PPG PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGP------PGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 562 PPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 692 PPSGGHAPPPPPPP 705
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 559 PPPGGXXXPPPPPP 600
PP GG PPPPPP
Sbjct: 692 PPSGGHAPPPPPPP 705
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 520 GGGXXXXXXXXKXPPPG--GXXXPPPPPPP 603
GGG PPP G PPPPPPP
Sbjct: 29 GGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = +1
Query: 559 PPPGGXXX--PPPPPPP 603
PPPGG PPPPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = +1
Query: 559 PPPGGXXX--PPPPPPP 603
PPPGG PPPPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 565 PGGXXXPPPPPPP 603
PGG PPPPPPP
Sbjct: 573 PGGPPPPPPPPPP 585
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +1
Query: 427 PPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXPPPGGXXXPPPPPPP 603
PPP F PPP GG F G PPP PPPPPPP
Sbjct: 66 PPPVPNGFIP--PPPGPGGIPPPPPMF--AGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 135 PPPPSPPPPPPPPPP 149
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 134 PPPPPSPPPPPPPPP 148
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 785 PPPRASEPPPPPPPP 799
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 784 PPPPRASEPPPPPPP 798
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 581 PPPPMLGGPPPPPPP 595
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 582 PPPMLGGPPPPPPPP 596
Score = 24.6 bits (51), Expect(2) = 2.2
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +1
Query: 682 PPPXXKXXXXXXXXXXXXXPPPPXXGGXXXXXAPP 786
PPP PPPP GG PP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Score = 23.8 bits (49), Expect(2) = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 583 PPPPPPP 603
PPPPPPP
Sbjct: 561 PPPPPPP 567
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 240 PPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 226 PPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 226 PPVGAGAPPPPPPPP 240
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 134 PPPTPAAPPPPPPPP 148
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
P P PPPPPPP
Sbjct: 136 PTPAAPPPPPPPPPP 150
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 289 PPPPRAGSPPPPPPP 303
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXPPPGGXXXPPPPP 597
G PPPP PPP G G PPP G PPPPP
Sbjct: 278 GSPPPPPAG----GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 310 PPPPRAGSPPPPPPP 324
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXPPPGGXXXPPPPP 597
G PPPP PPP G G PPP G PPPPP
Sbjct: 299 GSPPPPPAG----GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 295 PPPPRAGSPPPPPPP 309
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 418 GXPPPPXXXFFFXXXPPPXXGGGXEK*IFFFXXXGGGXXXXXXXXKXPPPGGXXXPPPPP 597
G PPPP PPP G G PPP G PPPPP
Sbjct: 284 GSPPPPPAG----GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>AC025726-31|AAK73929.1| 178|Caenorhabditis elegans Hypothetical
protein Y71G12B.3 protein.
Length = 178
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 559 PPPGGXXXPPPPPP 600
PP GG PPPPPP
Sbjct: 40 PPVGGNEVPPPPPP 53
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 562 PPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPP 71
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPPP 72
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 562 PPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPP 71
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPPP 72
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 562 PPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPP 71
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PP G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPPP 72
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 57 PPPPMCPPPPPPPPP 71
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 58 PPPMCPPPPPPPPPP 72
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 642 PPPPPPXKXXKKXPPP 689
PPPPPP K PPP
Sbjct: 86 PPPPPPPPTLKAPPPP 101
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 642 PPPPPPXKXXKKXPPP 689
PPPPPP K PPP
Sbjct: 85 PPPPPPPPPTLKAPPP 100
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 642 PPPPPPXKXXKKXPPP 689
PPPPPP ++ PPP
Sbjct: 479 PPPPPPENEPEEFPPP 494
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 299 PPPIKEESPPPPPPP 313
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP PPPPPPP
Sbjct: 299 PPPIKEESPPPPPPP 313
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPPG PP PPPP
Sbjct: 708 PPPGIPGYPPAPPPP 722
Score = 24.6 bits (51), Expect(2) = 7.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 409 FXLGXPPPPXXXFFFXXXPPPXXG 480
F L PPPP + PPP G
Sbjct: 702 FNLNAPPPPGIPGYPPAPPPPGVG 725
Score = 21.8 bits (44), Expect(2) = 7.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPP G PPP P
Sbjct: 719 PPPPGVGPPPPQGIP 733
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 559 PPPGGXXXPPPPPPP 603
PPPG PP PPPP
Sbjct: 2280 PPPGYMHTPPLPPPP 2294
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 520 GGGXXXXXXXXKXPPPGGXXXPPPPP 597
GG + PPP G PPPPP
Sbjct: 75 GGPPPHHQYHLQYPPPHGLGPPPPPP 100
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 565 PGGXXXPPPPPPP 603
P G PPPPPPP
Sbjct: 1006 PAGPGGPPPPPPP 1018
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 565 PGGXXXPPPPPPP 603
P G PPPPPPP
Sbjct: 245 PAGPGGPPPPPPP 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,152,973
Number of Sequences: 27780
Number of extensions: 266516
Number of successful extensions: 4984
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3471
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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