Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_N12
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 292 2e-79
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 292 2e-79
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 292 2e-79
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 292 2e-79
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 292 2e-79
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 292 2e-79
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 266 1e-71
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 266 1e-71
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 3.9
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 28 6.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 292 bits (716), Expect = 2e-79
Identities = 139/212 (65%), Positives = 164/212 (77%)
Frame = -2
Query: 731 GTXEDKVNWXQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKX 552
GT E KV+W + + + VD+VFAQDEMID I TSRWHTKKLPRKTHK
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 551 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 372
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 371 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 192
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 191 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 292 bits (716), Expect = 2e-79
Identities = 139/212 (65%), Positives = 164/212 (77%)
Frame = -2
Query: 731 GTXEDKVNWXQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKX 552
GT E KV+W + + + VD+VFAQDEMID I TSRWHTKKLPRKTHK
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 551 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 372
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 371 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 192
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 191 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 292 bits (716), Expect = 2e-79
Identities = 139/212 (65%), Positives = 164/212 (77%)
Frame = -2
Query: 731 GTXEDKVNWXQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKX 552
GT E KV+W + + + VD+VFAQDEMID I TSRWHTKKLPRKTHK
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Query: 551 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 372
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 150 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 206
Query: 371 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 192
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 207 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 266
Query: 191 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 267 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 292 bits (716), Expect = 2e-79
Identities = 139/212 (65%), Positives = 164/212 (77%)
Frame = -2
Query: 731 GTXEDKVNWXQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKX 552
GT E KV+W + + + VD+VFAQDEMID I TSRWHTKKLPRKTHK
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 551 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 372
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 371 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 192
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 191 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 292 bits (716), Expect = 2e-79
Identities = 139/212 (65%), Positives = 164/212 (77%)
Frame = -2
Query: 731 GTXEDKVNWXQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKX 552
GT E KV+W + + + VD+VFAQDEMID I TSRWHTKKLPRKTHK
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Query: 551 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 372
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 150 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 206
Query: 371 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 192
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 207 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 266
Query: 191 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 267 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 292 bits (716), Expect = 2e-79
Identities = 139/212 (65%), Positives = 164/212 (77%)
Frame = -2
Query: 731 GTXEDKVNWXQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKX 552
GT E KV+W + + + VD+VFAQDEMID I TSRWHTKKLPRKTHK
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 551 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 372
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 371 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 192
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 191 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 266 bits (652), Expect = 1e-71
Identities = 127/190 (66%), Positives = 148/190 (77%)
Frame = -2
Query: 665 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARA 486
V A +MID I TSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 485 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 306
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 305 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 126
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 125 GTLKKDRIRE 96
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 266 bits (652), Expect = 1e-71
Identities = 127/190 (66%), Positives = 148/190 (77%)
Frame = -2
Query: 665 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARA 486
V A +MID I TSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 485 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 306
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 305 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 126
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 125 GTLKKDRIRE 96
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +3
Query: 9 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 128
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 593 RWHTKKLP-RKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 432
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,467,627
Number of Sequences: 27780
Number of extensions: 397391
Number of successful extensions: 935
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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