Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_N08
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 227 5e-60
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 227 5e-60
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 118/237 (49%), Positives = 154/237 (64%)
Frame = -3
Query: 805 LAHTQMKLLNSDKRRVHIMESNLXGYHXGQSEMXPEKXWRNLSXSILCLPKMK*LTALXS 626
+AHTQMK+L +++ H++E + G Q + + + + +
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGV 222
Query: 625 PXXKDTKVSLLVGTQRSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 446
K + P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N
Sbjct: 223 TRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINN 282
Query: 445 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 266
KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKK
Sbjct: 283 KIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKK 339
Query: 265 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
R+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 340 RLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -2
Query: 782 VKQRQKKGSHYGIQLXGVPXRTK*NGPRENXEKPIPVDSVFAQDEMIDCIGVTXXKGYKG 603
+++RQKK IQ+ G K + RE+ EK + VD+VFAQDEMID IGVT G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 602 VTSRWHTKKLPRKTHKG 552
VTSRWHTKKLPRKTHKG
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 118/237 (49%), Positives = 154/237 (64%)
Frame = -3
Query: 805 LAHTQMKLLNSDKRRVHIMESNLXGYHXGQSEMXPEKXWRNLSXSILCLPKMK*LTALXS 626
+AHTQMK+L +++ H++E + G Q + + + + +
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGV 222
Query: 625 PXXKDTKVSLLVGTQRSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 446
K + P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N
Sbjct: 223 TRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINN 282
Query: 445 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 266
KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKK
Sbjct: 283 KIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKK 339
Query: 265 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
R+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 340 RLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -2
Query: 782 VKQRQKKGSHYGIQLXGVPXRTK*NGPRENXEKPIPVDSVFAQDEMIDCIGVTXXKGYKG 603
+++RQKK IQ+ G K + RE+ EK + VD+VFAQDEMID IGVT G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 602 VTSRWHTKKLPRKTHKG 552
VTSRWHTKKLPRKTHKG
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 118/237 (49%), Positives = 154/237 (64%)
Frame = -3
Query: 805 LAHTQMKLLNSDKRRVHIMESNLXGYHXGQSEMXPEKXWRNLSXSILCLPKMK*LTALXS 626
+AHTQMK+L +++ H++E + G Q + + + + +
Sbjct: 65 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGV 124
Query: 625 PXXKDTKVSLLVGTQRSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 446
K + P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N
Sbjct: 125 TRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINN 184
Query: 445 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 266
KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKK
Sbjct: 185 KIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKK 241
Query: 265 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
R+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 242 RLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -2
Query: 782 VKQRQKKGSHYGIQLXGVPXRTK*NGPRENXEKPIPVDSVFAQDEMIDCIGVTXXKGYKG 603
+++RQKK IQ+ G K + RE+ EK + VD+VFAQDEMID IGVT G+KG
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 132
Query: 602 VTSRWHTKKLPRKTHKG 552
VTSRWHTKKLPRKTHKG
Sbjct: 133 VTSRWHTKKLPRKTHKG 149
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 118/237 (49%), Positives = 154/237 (64%)
Frame = -3
Query: 805 LAHTQMKLLNSDKRRVHIMESNLXGYHXGQSEMXPEKXWRNLSXSILCLPKMK*LTALXS 626
+AHTQMK+L +++ H++E + G Q + + + + +
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGV 222
Query: 625 PXXKDTKVSLLVGTQRSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 446
K + P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N
Sbjct: 223 TRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINN 282
Query: 445 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 266
KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKK
Sbjct: 283 KIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKK 339
Query: 265 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
R+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 340 RLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -2
Query: 782 VKQRQKKGSHYGIQLXGVPXRTK*NGPRENXEKPIPVDSVFAQDEMIDCIGVTXXKGYKG 603
+++RQKK IQ+ G K + RE+ EK + VD+VFAQDEMID IGVT G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 602 VTSRWHTKKLPRKTHKG 552
VTSRWHTKKLPRKTHKG
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 118/237 (49%), Positives = 154/237 (64%)
Frame = -3
Query: 805 LAHTQMKLLNSDKRRVHIMESNLXGYHXGQSEMXPEKXWRNLSXSILCLPKMK*LTALXS 626
+AHTQMK+L +++ H++E + G Q + + + + +
Sbjct: 65 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGV 124
Query: 625 PXXKDTKVSLLVGTQRSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 446
K + P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N
Sbjct: 125 TRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINN 184
Query: 445 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 266
KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKK
Sbjct: 185 KIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKK 241
Query: 265 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
R+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 242 RLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -2
Query: 782 VKQRQKKGSHYGIQLXGVPXRTK*NGPRENXEKPIPVDSVFAQDEMIDCIGVTXXKGYKG 603
+++RQKK IQ+ G K + RE+ EK + VD+VFAQDEMID IGVT G+KG
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 132
Query: 602 VTSRWHTKKLPRKTHKG 552
VTSRWHTKKLPRKTHKG
Sbjct: 133 VTSRWHTKKLPRKTHKG 149
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 118/237 (49%), Positives = 154/237 (64%)
Frame = -3
Query: 805 LAHTQMKLLNSDKRRVHIMESNLXGYHXGQSEMXPEKXWRNLSXSILCLPKMK*LTALXS 626
+AHTQMK+L +++ H++E + G Q + + + + +
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGV 222
Query: 625 PXXKDTKVSLLVGTQRSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 446
K + P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N
Sbjct: 223 TRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINN 282
Query: 445 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 266
KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKK
Sbjct: 283 KIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKK 339
Query: 265 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
R+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 340 RLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -2
Query: 782 VKQRQKKGSHYGIQLXGVPXRTK*NGPRENXEKPIPVDSVFAQDEMIDCIGVTXXKGYKG 603
+++RQKK IQ+ G K + RE+ EK + VD+VFAQDEMID IGVT G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 602 VTSRWHTKKLPRKTHKG 552
VTSRWHTKKLPRKTHKG
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 227 bits (556), Expect = 5e-60
Identities = 106/162 (65%), Positives = 129/162 (79%)
Frame = -3
Query: 580 RSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = -2
Query: 665 VFAQDEMIDCIGVTXXKGYKGVTSRWHTKKLPRKTHKG 552
V A +MID IGVT G+KGVTSRWHTKKLPRKTHKG
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 227 bits (556), Expect = 5e-60
Identities = 106/162 (65%), Positives = 129/162 (79%)
Frame = -3
Query: 580 RSYPVRHTRXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 401
+ P + + LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 400 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 221
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 220 AALEKINLKFIDTSSKFGHGRFQTPVDKAAFMGTLKKDRIRE 95
A EKINLK+IDTSSK GHGRFQT +K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = -2
Query: 665 VFAQDEMIDCIGVTXXKGYKGVTSRWHTKKLPRKTHKG 552
V A +MID IGVT G+KGVTSRWHTKKLPRKTHKG
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,160,950
Number of Sequences: 27780
Number of extensions: 387746
Number of successful extensions: 955
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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