Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_N07
         (799 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L35013-1|AAA60300.1|  424|Homo sapiens spliceosomal protein prot...   121   3e-27
BC090883-1|AAH90883.1|  424|Homo sapiens splicing factor 3b, sub...   121   3e-27
BC013886-1|AAH13886.1|  424|Homo sapiens splicing factor 3b, sub...   121   3e-27
BC004273-1|AAH04273.1|  424|Homo sapiens splicing factor 3b, sub...   121   3e-27
AL591493-2|CAI12554.1|  424|Homo sapiens splicing factor 3b, sub...   121   3e-27
AL591493-1|CAI12553.1|  190|Homo sapiens splicing factor 3b, sub...   121   3e-27
AL590487-2|CAI12648.1|  424|Homo sapiens splicing factor 3b, sub...   121   3e-27
AL590487-1|CAI12647.1|  190|Homo sapiens splicing factor 3b, sub...   121   3e-27
AK223322-1|BAD97042.1|  424|Homo sapiens splicing factor 3b, sub...   121   3e-27

>L35013-1|AAA60300.1|  424|Homo sapiens spliceosomal protein
           protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


>BC090883-1|AAH90883.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


>BC013886-1|AAH13886.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


>BC004273-1|AAH04273.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


>AL591493-2|CAI12554.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


>AL591493-1|CAI12553.1|  190|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 190

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 80  FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 139

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 140 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 178


>AL590487-2|CAI12648.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


>AL590487-1|CAI12647.1|  190|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 190

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 80  FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 139

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 140 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 178


>AK223322-1|BAD97042.1|  424|Homo sapiens splicing factor 3b,
           subunit 4 variant protein.
          Length = 424

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -3

Query: 752 FGVILXTPKVMXDXETG-IQXXXXXXXXXXXXXXXXXXAMNNQYXCNRPISVSYAFKKDV 576
           FGVIL TPK+M D +TG  +                  AMN QY CNRPI+VSYAFKKD 
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182

Query: 575 QGERHGSAAERLLXAQNPLSHADRPHQLFADAPPTLMGP 459
           +GERHGSAAERLL AQNPLS ADRPHQLFADAPP    P
Sbjct: 183 KGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAP 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,729,523
Number of Sequences: 237096
Number of extensions: 727316
Number of successful extensions: 1190
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)