Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_M20
         (813 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L24559-1|AAA16459.1|  598|Homo sapiens DNA polymerase alpha prot...    35   0.30 
CR456737-1|CAG33018.1|  598|Homo sapiens POLA2 protein.                35   0.30 
BC002990-1|AAH02990.1|  598|Homo sapiens polymerase (DNA directe...    35   0.30 
BC001347-1|AAH01347.1|  598|Homo sapiens polymerase (DNA directe...    35   0.30 
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.          31   5.0  
DQ996467-1|ABI97388.1|  655|Homo sapiens ATP-binding cassette, s...    31   5.0  
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni...    31   5.0  
BC092408-1|AAH92408.1|  611|Homo sapiens ABCG2 protein protein.        31   5.0  
BC021281-1|AAH21281.1|  655|Homo sapiens ATP-binding cassette, s...    31   5.0  
AY333756-1|AAQ92942.1|  655|Homo sapiens ATP-binding cassette su...    31   5.0  
AY333755-1|AAQ92941.1|  655|Homo sapiens mutant ATP-binding cass...    31   5.0  
AY017168-1|AAG52982.1|  655|Homo sapiens ABC transporter ABCG2 p...    31   5.0  
AF463519-1|AAO14617.1|  655|Homo sapiens ATP-binding cassette pr...    31   5.0  
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte...    31   5.0  
AF098951-1|AAC97367.1|  655|Homo sapiens breast cancer resistanc...    31   5.0  
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto...    31   5.0  
AC097484-1|AAY40902.1|  607|Homo sapiens unknown protein.              31   5.0  
AB056867-1|BAB39212.1|  655|Homo sapiens Breast Cancer Resistanc...    31   5.0  
AB051855-1|BAB46933.1|  655|Homo sapiens ATP-binding cassette su...    31   5.0  

>L24559-1|AAA16459.1|  598|Homo sapiens DNA polymerase alpha
           protein.
          Length = 598

 Score = 35.1 bits (77), Expect = 0.30
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 679 NQTVPPQ*GNXLQNLHTPRHDVCKRSVRSRSPHPLEIPSGYS 554
           N    P  G+  + + TP   + KRSV +RSPH L  PS +S
Sbjct: 111 NSYTTPSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152


>CR456737-1|CAG33018.1|  598|Homo sapiens POLA2 protein.
          Length = 598

 Score = 35.1 bits (77), Expect = 0.30
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 679 NQTVPPQ*GNXLQNLHTPRHDVCKRSVRSRSPHPLEIPSGYS 554
           N    P  G+  + + TP   + KRSV +RSPH L  PS +S
Sbjct: 111 NSYTTPSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152


>BC002990-1|AAH02990.1|  598|Homo sapiens polymerase (DNA directed),
           alpha 2 (70kD subunit) protein.
          Length = 598

 Score = 35.1 bits (77), Expect = 0.30
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 679 NQTVPPQ*GNXLQNLHTPRHDVCKRSVRSRSPHPLEIPSGYS 554
           N    P  G+  + + TP   + KRSV +RSPH L  PS +S
Sbjct: 111 NSYTTPSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152


>BC001347-1|AAH01347.1|  598|Homo sapiens polymerase (DNA directed),
           alpha 2 (70kD subunit) protein.
          Length = 598

 Score = 35.1 bits (77), Expect = 0.30
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 679 NQTVPPQ*GNXLQNLHTPRHDVCKRSVRSRSPHPLEIPSGYS 554
           N    P  G+  + + TP   + KRSV +RSPH L  PS +S
Sbjct: 111 NSYTTPSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152


>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
          Length = 1566

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 358  GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 224
            GKPS+  +    GS  S +G+  HH H S SSS+ S + K  +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103


>DQ996467-1|ABI97388.1|  655|Homo sapiens ATP-binding cassette,
           sub-family G (WHITE), member 2 protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
            protein.
          Length = 1581

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 358  GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 224
            GKPS+  +    GS  S +G+  HH H S SSS+ S + K  +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118


>BC092408-1|AAH92408.1|  611|Homo sapiens ABCG2 protein protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>BC021281-1|AAH21281.1|  655|Homo sapiens ATP-binding cassette,
           sub-family G (WHITE), member 2 protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AY333756-1|AAQ92942.1|  655|Homo sapiens ATP-binding cassette
           sub-family G (WHITE) member 2 protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AY333755-1|AAQ92941.1|  655|Homo sapiens mutant ATP-binding
           cassette sub-family G (WHITE) member 2 protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AY017168-1|AAG52982.1|  655|Homo sapiens ABC transporter ABCG2
           protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AF463519-1|AAO14617.1|  655|Homo sapiens ATP-binding cassette
           protein ABCG2 protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
            receptor-interacting protein complex component DRIP205
            protein.
          Length = 1566

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 358  GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 224
            GKPS+  +    GS  S +G+  HH H S SSS+ S + K  +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103


>AF098951-1|AAC97367.1|  655|Homo sapiens breast cancer resistance
           protein protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
            receptor-associated protein complex component TRAP220
            protein.
          Length = 1581

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 358  GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 224
            GKPS+  +    GS  S +G+  HH H S SSS+ S + K  +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118


>AC097484-1|AAY40902.1|  607|Homo sapiens unknown protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AB056867-1|BAB39212.1|  655|Homo sapiens Breast Cancer Resistance
           Protein protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


>AB051855-1|BAB46933.1|  655|Homo sapiens ATP-binding cassette
           superfamily G (White) member 2 protein.
          Length = 655

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 493 VEIHIPKEPGRSDGYPAES*LNNLKGFQVGVGCVSEHYACIR 618
           VE+ IP   G ++G+PA +  N+LK F  G   +S H  C R
Sbjct: 6   VEVFIPVSQGNTNGFPATA-SNDLKAFTEG-AVLSFHNICYR 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,245,108
Number of Sequences: 237096
Number of extensions: 2223849
Number of successful extensions: 8430
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8414
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)