Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_M18
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572...    29   4.6  
01_06_0581 - 30386018-30386440                                         29   4.6  

>04_04_0201 - 23555336-23556008,23556097-23556258,23556353-23557206,
            23557452-23557613,23558197-23558649,23559729-23559788,
            23559983-23560058,23561546-23561593,23561948-23562022,
            23562067-23562494
          Length = 996

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +1

Query: 634  HXPPXLPXXPRXXPXXPXLGXNXVTSHAPXPXPRGXPXXPXXXP 765
            H    LP  P   P  P         HAP P  RG P  P   P
Sbjct: 870  HFGLHLPPPPPRDPLAPMSNFPYSLGHAPSPALRGLPPPPPPPP 913


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 271 SGVRSQVLERLEMRLRSGGGGARRQ 345
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,405,783
Number of Sequences: 37544
Number of extensions: 167890
Number of successful extensions: 747
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)