Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_M04
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 157 1e-38
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 31 0.91
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 31 0.91
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 31 0.91
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 4.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 4.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.4
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.5
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.5
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.5
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 157 bits (380), Expect = 1e-38
Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 5/122 (4%)
Frame = -2
Query: 674 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIA 495
GRF+PG TNQIQ F+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI
Sbjct: 101 GRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIG 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDPEESEKDEQ 330
+PCN K SIGLMWW+LARE+L LRG + R + +++ DL+FYRDP E+EK+E
Sbjct: 161 VPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEKEET 220
Query: 329 QA 324
A
Sbjct: 221 GA 222
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 765 PXDVFVXSSRPFGQRAVLK 709
P DV V S+RP+ QRA+LK
Sbjct: 71 PADVVVVSARPYAQRALLK 89
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -3
Query: 679 CGDVSHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 515
CG SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3336 CG--SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -3
Query: 679 CGDVSHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 515
CG SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3347 CG--SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -3
Query: 679 CGDVSHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 515
CG SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3347 CG--SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -3
Query: 679 CGDVSHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 515
CG SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3347 CG--SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 213 CCTRCSSCFWSTPCSRRMVCP 151
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -3
Query: 757 CVRHXITALRSACCTEVCRAHR-CYAYCG 674
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -3
Query: 757 CVRHXITALRSACCTEVCRAHR-CYAYCG 674
C R T R+ CCT C R C CG
Sbjct: 94 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -3
Query: 757 CVRHXITALRSACCTEVCRAHR-CYAYCG 674
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -3
Query: 757 CVRHXITALRSACCTEVCRAHR-CYAYCG 674
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -3
Query: 757 CVRHXITALRSACCTEVCRAHR-CYAYCG 674
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 533 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 426
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 561 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 454
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 164 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 482 TKSSHSIGLMWWLLA 438
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 164 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,134,068
Number of Sequences: 27780
Number of extensions: 328216
Number of successful extensions: 947
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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