Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_M02
         (807 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.       29   3.0  
Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z75710-7|CAN99690.1|  855|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z75710-6|CAB00028.1|  857|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...    28   6.8  
AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical ...    28   6.8  
AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical ...    28   6.8  
AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical ...    28   6.8  
AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        28   6.8  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1 pro...    28   9.0  

>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
            C25G4.5 protein.
          Length = 1263

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +2

Query: 83   RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKPDSIDLRDPNGLRRRVSRFECETRLVK 262
            R   KS+ D +E        PD ++ D R   +P +      N   R+V    C T L  
Sbjct: 1076 RSPNKSNHDVNETMKALTEMPDYQAADERPNNQPTTSTYGTANTENRKVHINGCHTLL-- 1133

Query: 263  SHCLEPPDSRGSTV 304
            S  L  P   G TV
Sbjct: 1134 SLALSMPSRMGETV 1147


>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
          Length = 1263

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +2

Query: 83   RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKPDSIDLRDPNGLRRRVSRFECETRLVK 262
            R   KS+ D +E        PD ++ D R   +P +      N   R+V    C T L  
Sbjct: 1076 RSPNKSNHDVNETMKALTEMPDYQAADERPNNQPTTSTYGTANTENRKVHINGCHTLL-- 1133

Query: 263  SHCLEPPDSRGSTV 304
            S  L  P   G TV
Sbjct: 1134 SLALSMPSRMGETV 1147


>Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 266 VTLLVAFRIQNARRDVEAHLDRGDRCYRVFS*HVHHGSEGPDITQFD 126
           +T L+  +I NA    E++ D  +    V   H+++ SEG ++TQ +
Sbjct: 11  LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56


>Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 266 VTLLVAFRIQNARRDVEAHLDRGDRCYRVFS*HVHHGSEGPDITQFD 126
           +T L+  +I NA    E++ D  +    V   H+++ SEG ++TQ +
Sbjct: 11  LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56


>Z75710-7|CAN99690.1|  855|Caenorhabditis elegans Hypothetical
           protein D1081.7b protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 653 PVVTFLGPSC*KTLYTKGSIGRXFRSPYA 739
           P  +FLG      L T GS  R FR PYA
Sbjct: 132 PARSFLGSGATNNLSTHGSSFRAFRGPYA 160


>Z75710-6|CAB00028.1|  857|Caenorhabditis elegans Hypothetical
           protein D1081.7a protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 653 PVVTFLGPSC*KTLYTKGSIGRXFRSPYA 739
           P  +FLG      L T GS  R FR PYA
Sbjct: 132 PARSFLGSGATNNLSTHGSSFRAFRGPYA 160


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 71  STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKP 184
           S +PR ER++S  YS  R R+      RSR     + P
Sbjct: 214 SRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSP 251


>AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 266 VTLLVAFRIQNARRDVEAHLDRGDRCYRVFS*HVHHGSEGPDITQFD 126
           +T L+  +I NA    E++ D  +    V   H+++ SEG ++TQ +
Sbjct: 11  LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56


>AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 266 VTLLVAFRIQNARRDVEAHLDRGDRCYRVFS*HVHHGSEGPDITQFD 126
           +T L+  +I NA    E++ D  +    V   H+++ SEG ++TQ +
Sbjct: 11  LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56


>AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 266 VTLLVAFRIQNARRDVEAHLDRGDRCYRVFS*HVHHGSEGPDITQFD 126
           +T L+  +I NA    E++ D  +    V   H+++ SEG ++TQ +
Sbjct: 11  LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56


>AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 266 VTLLVAFRIQNARRDVEAHLDRGDRCYRVFS*HVHHGSEGPDITQFD 126
           +T L+  +I NA    E++ D  +    V   H+++ SEG ++TQ +
Sbjct: 11  LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 71  STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKP 184
           S +PR ER++S  YS  R R+      RSR     + P
Sbjct: 214 SRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSP 251


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -1

Query: 426 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 247
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 246 SH--SKRETRRRSP 211
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


>Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical
           protein F11A1.3a protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 152 RSRDARVKKKPDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPD 322
           +S +    + PD ++  +P   R+RV+R        K++CL PP+S      +S PD
Sbjct: 11  QSMEIETNENPDKVE--EPVVRRKRVTRRRHRRIHSKNNCLTPPNS-DDDPQMSTPD 64


>AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1
           protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 152 RSRDARVKKKPDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPD 322
           +S +    + PD ++  +P   R+RV+R        K++CL PP+S      +S PD
Sbjct: 11  QSMEIETNENPDKVE--EPVVRRKRVTRRRHRRIHSKNNCLTPPNS-DDDPQMSTPD 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,489,840
Number of Sequences: 27780
Number of extensions: 391848
Number of successful extensions: 1107
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)