Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_L16
         (918 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.4  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   9.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 487 PPPPPPPP 464
           PPPPPPPP
Sbjct: 783 PPPPPPPP 790



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 487 PPPPPPPP 464
           PPPPPPPP
Sbjct: 784 PPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 484 PPPPPPPG 461
           PPPPPPPG
Sbjct: 530 PPPPPPPG 537



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 487 PPPPPPPPG 461
           PPPPPPP G
Sbjct: 530 PPPPPPPGG 538



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -3

Query: 487 PPPPPPPPGXXXKKKXXXGG 428
           PP PPPPP          GG
Sbjct: 582 PPAPPPPPPMGPPPSPLAGG 601



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -1

Query: 486 PPPPXPPXXXXXKKXXGGXGGXXPP 412
           PPP  PP         GG  G  PP
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -3

Query: 487 PPPPPPPPGXXXKKKXXXGGG 425
           PPP PPPP           GG
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGG 601



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -3

Query: 487 PPPPPPPPGXXXKKKXXXGGGGXP 416
           P PPPPPP          G  G P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGP 606


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 14/48 (29%), Positives = 15/48 (31%)
 Frame = +1

Query: 391 PXXXXXXGGGXPPXPXXXFFXXXXXGGXGGGGGXXXXXXGGXXXPPPR 534
           P      GGG        F      GG GGGGG            PP+
Sbjct: 506 PSSAVTPGGGRAEGDKVTFQIPNGGGGGGGGGGREGSQEWNSRSRPPQ 553


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 466 GGXGGGGGXXXXXXGGXXXPPP 531
           GG GGGGG      G     PP
Sbjct: 551 GGGGGGGGGGVIGSGSTTRLPP 572


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 534 AGGGXXXPPXXXXXXXPPPPXPP 466
           AGG    PP       PPPP PP
Sbjct: 741 AGGPSSSPPVMESI--PPPPKPP 761


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,602
Number of Sequences: 2352
Number of extensions: 8108
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)