Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_L10
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 163 2e-40
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 163 2e-40
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 163 2e-40
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 163 2e-40
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 163 2e-40
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 28 7.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 103 bits (248), Expect = 1e-22
Identities = 52/93 (55%), Positives = 56/93 (60%)
Frame = -1
Query: 737 GXPLGDKXKWAKGXXGKTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTH 558
G + K WA+ K DEMID I T RWHTKK PRKTH
Sbjct: 187 GGTIEQKVDWAREHLEKQVQVDTVFAQ-DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 557 KVLRKVACIGAWHPXRVSFTVARAGQKGYHHRT 459
K LRKVACIGAWHP RV+FTVARAGQKG+HHRT
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 278
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 103 bits (248), Expect = 1e-22
Identities = 52/93 (55%), Positives = 56/93 (60%)
Frame = -1
Query: 737 GXPLGDKXKWAKGXXGKTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTH 558
G + K WA+ K DEMID I T RWHTKK PRKTH
Sbjct: 187 GGTIEQKVDWAREHLEKQVQVDTVFAQ-DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 557 KVLRKVACIGAWHPXRVSFTVARAGQKGYHHRT 459
K LRKVACIGAWHP RV+FTVARAGQKG+HHRT
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 278
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 182 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 239 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 103 bits (248), Expect = 1e-22
Identities = 52/93 (55%), Positives = 56/93 (60%)
Frame = -1
Query: 737 GXPLGDKXKWAKGXXGKTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTH 558
G + K WA+ K DEMID I T RWHTKK PRKTH
Sbjct: 89 GGTIEQKVDWAREHLEKQVQVDTVFAQ-DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 147
Query: 557 KVLRKVACIGAWHPXRVSFTVARAGQKGYHHRT 459
K LRKVACIGAWHP RV+FTVARAGQKG+HHRT
Sbjct: 148 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 180
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 232 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 289 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 99 bits (238), Expect = 2e-21
Identities = 48/77 (62%), Positives = 51/77 (66%)
Frame = -1
Query: 689 KTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTHKVLRKVACIGAWHPXR 510
K SI +MID I T RWHTKK PRKTHK LRKVACIGAWHP R
Sbjct: 154 KKYCSSIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 213
Query: 509 VSFTVARAGQKGYHHRT 459
V+FTVARAGQKG+HHRT
Sbjct: 214 VAFTVARAGQKGFHHRT 230
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 103 bits (248), Expect = 1e-22
Identities = 52/93 (55%), Positives = 56/93 (60%)
Frame = -1
Query: 737 GXPLGDKXKWAKGXXGKTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTH 558
G + K WA+ K DEMID I T RWHTKK PRKTH
Sbjct: 187 GGTIEQKVDWAREHLEKQVQVDTVFAQ-DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 557 KVLRKVACIGAWHPXRVSFTVARAGQKGYHHRT 459
K LRKVACIGAWHP RV+FTVARAGQKG+HHRT
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 278
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 182 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 239 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 103 bits (248), Expect = 1e-22
Identities = 52/93 (55%), Positives = 56/93 (60%)
Frame = -1
Query: 737 GXPLGDKXKWAKGXXGKTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTH 558
G + K WA+ K DEMID I T RWHTKK PRKTH
Sbjct: 89 GGTIEQKVDWAREHLEKQVQVDTVFAQ-DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 147
Query: 557 KVLRKVACIGAWHPXRVSFTVARAGQKGYHHRT 459
K LRKVACIGAWHP RV+FTVARAGQKG+HHRT
Sbjct: 148 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 180
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 232 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 289 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 99 bits (238), Expect = 2e-21
Identities = 48/77 (62%), Positives = 51/77 (66%)
Frame = -1
Query: 689 KTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTHKVLRKVACIGAWHPXR 510
K SI +MID I T RWHTKK PRKTHK LRKVACIGAWHP R
Sbjct: 154 KKYCSSIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 213
Query: 509 VSFTVARAGQKGYHHRT 459
V+FTVARAGQKG+HHRT
Sbjct: 214 VAFTVARAGQKGFHHRT 230
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 163 bits (395), Expect = 2e-40
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = -2
Query: 454 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 274 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 103 bits (248), Expect = 1e-22
Identities = 52/93 (55%), Positives = 56/93 (60%)
Frame = -1
Query: 737 GXPLGDKXKWAKGXXGKTXSXSIXXXPXDEMIDXIXXXXXXXXXXXTFRWHTKKXPRKTH 558
G + K WA+ K DEMID I T RWHTKK PRKTH
Sbjct: 187 GGTIEQKVDWAREHLEKQVQVDTVFAQ-DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 557 KVLRKVACIGAWHPXRVSFTVARAGQKGYHHRT 459
K LRKVACIGAWHP RV+FTVARAGQKG+HHRT
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 278
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +2
Query: 8 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 127
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 393 LITLPSFLWIPCPIR*IFLFISSTVMITFLTSTSYSERHPXRMPS 527
+I+LP F+ P I + +F++ TV ++FLTS S++ +PS
Sbjct: 142 MISLPFFILSPLLIF-LKIFLNDTVDVSFLTSISFAVFTSAPIPS 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,173,132
Number of Sequences: 27780
Number of extensions: 333488
Number of successful extensions: 817
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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