Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_K24
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.1  
AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA...    29   5.4  
AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-P...    29   5.4  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 41    VPAQMGRAGYVRLNDLHGVVSRPRAQGF*SPPTKRLPCTLTPDVQS 178
             VP+  G     + ND +G V + + + F SPP  R  C + PD QS
Sbjct: 12097 VPSPCGPNSICK-NDRNGPVCQCQPEFFGSPPNCRPECIINPDCQS 12141


>AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA
           protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 177 PLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSXR 287
           PL  +N  EV   PR++L+P  +A P  A+P  P  R
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387


>AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-PA
           protein.
          Length = 1056

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 22/80 (27%), Positives = 31/80 (38%)
 Frame = +3

Query: 102 ADRGPKDFRAHPLNDSPALLHPTSNPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 281
           AD  PKD  +   + +   ++ T +PL   NP +   +P      D   +P D  P  P 
Sbjct: 723 ADNTPKDSSSSGSSSTTTFVNTTPSPLDAGNPFDSATIPAWLRDFD---YP-DVGPGVPF 778

Query: 282 XRIEXSETSXVSVRQPVGPP 341
                   S  S R P  PP
Sbjct: 779 DPDNFGTASASSTRNPTNPP 798


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,020,270
Number of Sequences: 53049
Number of extensions: 505610
Number of successful extensions: 1956
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)