Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K19
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 60 3e-09
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 57 2e-08
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 52 5e-07
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 43 3e-04
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 43 3e-04
12_01_0024 + 178539-179418,179593-179938,180127-180244 42 8e-04
03_04_0145 + 17683681-17683982,17686058-17686145 33 0.20
02_01_0140 + 1014594-1016048 32 0.47
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 32 0.62
12_01_0710 - 6155357-6155708,6156354-6156604,6158874-6158987 31 0.82
05_03_0212 + 10260690-10261272,10261921-10262435,10262446-102625... 31 0.82
04_03_0596 - 17775203-17775247,17775772-17775830,17776093-17776609 31 1.1
06_01_0889 - 6807449-6809257 31 1.4
05_03_0062 - 7917596-7918129,7918279-7918447,7919007-7919182,791... 30 2.5
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 30 2.5
01_06_0221 - 27653591-27653724,27654270-27654473,27655216-276553... 29 4.4
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 29 5.8
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 29 5.8
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 28 7.7
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 28 7.7
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/80 (36%), Positives = 51/80 (63%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD+V+ ++L ++L ++G P+ + +I +L T+ + + ++ + +G+RQGDP
Sbjct: 45 KAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDP 104
Query: 273 LSPILFNVVMDLILASLPER 214
LSP LF +V D +L L ER
Sbjct: 105 LSPYLFILVAD-VLQRLLER 123
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/73 (35%), Positives = 46/73 (63%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFDT+ H A++ +++ G P ++ ++ ++ TAS+ + +N + K RGVRQG P
Sbjct: 460 KAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRGVRQGVP 519
Query: 273 LSPILFNVVMDLI 235
LS +LF + +L+
Sbjct: 520 LSLLLFVLGAELL 532
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD+V +L ++L +RG PE + +I L ++ + + +N + +G+ QGDP
Sbjct: 1060 KAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRWICCKKGLLQGDP 1119
Query: 273 LSPILFNVVMDLILASLPER 214
LS LF +V D +L L ER
Sbjct: 1120 LSSYLFILVAD-VLQRLLER 1138
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KA+D + L L G + + + + + +N E++ V RG+RQGDP
Sbjct: 261 KAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTDTVVPSRGIRQGDP 320
Query: 273 LSPILF 256
+SP LF
Sbjct: 321 ISPYLF 326
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3
Query: 360 YDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNVVMDLILASLPERV 211
Y T + +N +S P K RG+RQGDPLSP+LF V+ + A L ++V
Sbjct: 210 YLLEETRIDINGTLSDPFKPMRGLRQGDPLSPLLF--VLKAMSAGLLDKV 257
>12_01_0024 + 178539-179418,179593-179938,180127-180244
Length = 447
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 363 LYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILF 256
++ TAS+ + +N + K RGVRQGDPLSP+LF
Sbjct: 2 VFSTASSAVLLNGVPGNSFKCRRGVRQGDPLSPLLF 37
>03_04_0145 + 17683681-17683982,17686058-17686145
Length = 129
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3
Query: 297 RGVRQGDPLSPILFNVVMDL 238
RGVRQGDPLSP+LF + +L
Sbjct: 104 RGVRQGDPLSPLLFVIGAEL 123
>02_01_0140 + 1014594-1016048
Length = 484
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -3
Query: 594 LAAPLMHDSADLSAPTVRWRIPQY----WTRCLGIAGRSCGNVTWRC*TSPKAFDTVSHE 427
LAA L++D A S P W +P + W G+A + NV R T+ FD V+
Sbjct: 133 LAAVLLNDMA--STPVYLWTVPMFHCNGWCMAWGVAAQGGTNVCVRRVTAATIFDAVARH 190
Query: 426 ALVEL 412
+ +
Sbjct: 191 GVTHM 195
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 297 RGVRQGDPLSPILFNVVMD 241
RG+RQGDPLSP LF + D
Sbjct: 279 RGLRQGDPLSPYLFLFIAD 297
>12_01_0710 - 6155357-6155708,6156354-6156604,6158874-6158987
Length = 238
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = -3
Query: 411 LRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNVVMD 241
L+ R P ++ ++ L T+++ + + + ++ RG+R G+PLS +LF + D
Sbjct: 37 LQQRAFPPRWRNWLGALLSTSTSQVVLIGILVHRIQHCRGLRLGNPLSTLLFILAFD 93
>05_03_0212 +
10260690-10261272,10261921-10262435,10262446-10262569,
10262840-10263042,10263169-10263240,10264905-10265007,
10265350-10265582
Length = 610
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 297 RGVRQGDPLSPILFNVVMDLI 235
RGVRQGDPL P+LF + +L+
Sbjct: 548 RGVRQGDPLPPLLFVLGAELL 568
>04_03_0596 - 17775203-17775247,17775772-17775830,17776093-17776609
Length = 206
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 291 PLVPLLQGCSFHCSRLRWWTPYRIGEQCSRR 383
P P L GC+ C L + P+ IG+ C R+
Sbjct: 25 PTAPTLAGCNTSCGNLTFEYPFGIGQGCFRQ 55
>06_01_0889 - 6807449-6809257
Length = 602
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 658 PISITSIP-LRHFHSXLARRLLASCPPDARQ 569
PI IT+I LR HS L R LAS PP AR+
Sbjct: 12 PIPITTIAELRQHHSQLVRLGLASHPPHARR 42
>05_03_0062 -
7917596-7918129,7918279-7918447,7919007-7919182,
7919235-7919360,7920196-7920342
Length = 383
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 339 LAVNNEMSSPVKVGRGVRQGDPLSPILF 256
L ++N + + RG+RQGDP+SP LF
Sbjct: 40 LYLSNILDHEIIPIRGLRQGDPISPYLF 67
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 742 GENPEILRQCRTVFVPKVEKPGGPGEYRPISITSIPLRHFHSXLARRL 599
G PE + V +PK ++P +YRPIS+ ++ + L RL
Sbjct: 941 GLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRL 988
>01_06_0221 -
27653591-27653724,27654270-27654473,27655216-27655315,
27655728-27655888,27656846-27656930,27657548-27657614,
27658434-27658541,27658639-27658704,27659341-27659387,
27659497-27659691,27659833-27659877
Length = 403
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 470 RHVTFPQLLPAIP-KHRVQYCGILQRTVGADKSALSCIRGAASQQP 604
RH F +LLP++P + Y ++++T G S + + A+ QP
Sbjct: 296 RHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEAAMQP 341
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 99 HSPQQRWTPASLPSTPQA 152
HS ++ W P SLP TPQ+
Sbjct: 687 HSSEECWNPNSLPDTPQS 704
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 78 VGPSAYRHSPQQRWTPASLPSTPQAGLGRQHRPERTRVPSP 200
VGPSA + + QQ PAS P A R+ P RV SP
Sbjct: 241 VGPSAEKATKQQPRKPAS-PQRKPAPSPRRRSPPSRRVESP 280
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 485 GMSRGGARLRPRHLTQCL 432
G+ GGARLRP +T CL
Sbjct: 21 GLGLGGARLRPSRVTACL 38
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 491 AAGMSRGGARLRPRHLTQCL 432
AA + GGARLRP +T CL
Sbjct: 14 AAAAALGGARLRPSRVTACL 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,408,067
Number of Sequences: 37544
Number of extensions: 633345
Number of successful extensions: 2075
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2074
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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