Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K19
(812 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 83 3e-16
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 40 0.004
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 40 0.004
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 39 0.009
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 34 0.20
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 32 1.1
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 32 1.1
BT023682-1|AAY85082.1| 142|Drosophila melanogaster IP04259p pro... 31 2.5
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 31 2.5
AE014297-3654|AAF56354.1| 142|Drosophila melanogaster CG13641-P... 31 2.5
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 30 3.3
BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p pro... 30 4.3
AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein... 30 4.3
AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA... 30 4.3
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 83.4 bits (197), Expect = 3e-16
Identities = 40/97 (41%), Positives = 59/97 (60%)
Frame = -2
Query: 742 GENPEILRQCRTVFVPKVEKPGGPGEYRPISITSIPLRHFHSXLARRLLASCPPDARQRG 563
G P +R RTVF+PK P ++RPIS+ S+ +R ++ LA RL +S D RQRG
Sbjct: 389 GNLPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSINWDPRQRG 448
Query: 562 FICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAQ 452
F+ DG +N+ ++D VL S K R C++A LD ++
Sbjct: 449 FLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSK 485
Score = 81.8 bits (193), Expect = 1e-15
Identities = 45/131 (34%), Positives = 70/131 (53%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD++SH ++ + LR G P+ F Y+ + Y+ T+L + S RGV+QGDP
Sbjct: 485 KAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDP 544
Query: 273 LSPILFNVVMDLILASLPERVGYRLEMEXXXXXXXXXXXXXXAGSKVGMQESISAVDCVG 94
LSPILFN+VMD +L +LP +G ++ A +++G+Q +
Sbjct: 545 LSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETRMGLQVLLDKTLDFL 604
Query: 93 RQMGLRLNCRK 61
+GL+LN K
Sbjct: 605 SIVGLKLNADK 615
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -3
Query: 450 AFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPL 271
AFDTV H+ L+ L++ G P + + ++ +N+ S+ + GV QG L
Sbjct: 613 AFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVL 672
Query: 270 SPILFNV 250
P LFN+
Sbjct: 673 GPTLFNI 679
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -3
Query: 450 AFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPL 271
AFDTV H+ L+ L++ G P + + ++ +N+ S+ + GV QG L
Sbjct: 561 AFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVL 620
Query: 270 SPILFNV 250
P LFN+
Sbjct: 621 GPTLFNI 627
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
+AFD V ++++ L+ + YI + T+ V SSP+ + G+ QG P
Sbjct: 579 RAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSP 638
Query: 273 LSPILFNVVMD 241
+S ILF + +
Sbjct: 639 ISVILFLIAFN 649
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.20
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
+AFD V A++ L G+ + I S + +NN S+ + G+ QG P
Sbjct: 587 RAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSP 646
Query: 273 LSPILFNVVMD 241
LS +LF + ++
Sbjct: 647 LSVVLFMIAIE 657
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 787 SXHLKAEM---FNAWMARGENPEILRQCRTVFVPKVEKPGGP-GEYRPISITSIPLRHFH 620
S HLK ++ FN + G+ P R + + K KP YRPIS+ S +
Sbjct: 468 SPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLE 527
Query: 619 SXLARRL 599
+A+RL
Sbjct: 528 KIIAQRL 534
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 31.9 bits (69), Expect = 1.1
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = -2
Query: 766 MFNAWMARGENPEILRQCRTVFVPKVEKPGG-PGEYRPISITSIPLRHFHSXLARR---- 602
+FNA G P+ ++ V +PK K P YRPIS+ + + F L R
Sbjct: 474 LFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPH 533
Query: 601 LLASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAQ 452
L + Q GF GT+E + + + + + C LD AQ
Sbjct: 534 LRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQ 583
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 31.9 bits (69), Expect = 1.1
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = -2
Query: 766 MFNAWMARGENPEILRQCRTVFVPKVEKPGG-PGEYRPISITSIPLRHFHSXLARR---- 602
+FNA G P+ ++ V +PK K P YRPIS+ + + F L R
Sbjct: 474 LFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPH 533
Query: 601 LLASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAQ 452
L + Q GF GT+E + + + + + C LD AQ
Sbjct: 534 LRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQ 583
>BT023682-1|AAY85082.1| 142|Drosophila melanogaster IP04259p
protein.
Length = 142
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 454 GRSLAPPRDIPAASSCYPQAPRPVLRNSPAYXXXXXXXAVVH 579
G + PPR +PAA+ YP P +R SP Y A VH
Sbjct: 83 GYAYYPPRPVPAANDYYP--PPWSVRPSPGYYSQPSHPASVH 122
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 766 MFNAWMARGENPEILRQCRTVFVPKVEKPGGPGEYRPISITSIPLRHFHSXLARRL 599
+FNA G P+ ++ + +PK EK YRPIS+ + + F L R+
Sbjct: 16 LFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRI 71
>AE014297-3654|AAF56354.1| 142|Drosophila melanogaster CG13641-PA
protein.
Length = 142
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 454 GRSLAPPRDIPAASSCYPQAPRPVLRNSPAYXXXXXXXAVVH 579
G + PPR +PAA+ YP P +R SP Y A VH
Sbjct: 83 GYAYYPPRPVPAANDYYP--PPWSVRPSPGYYSQPSHPASVH 122
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = -2
Query: 766 MFNAWMARGENPEILRQCRTVFVPKVEKPGG-PGEYRPISITSIPLRHFHSXLARRL--- 599
++N+ + G PE + + + K K P YRPIS+ S + F L +RL
Sbjct: 535 IYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRV 594
Query: 598 -LASCPPDARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAQ 452
L Q GF GT + A + + ++ ++ C LD ++
Sbjct: 595 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISE 644
>BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p protein.
Length = 1287
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 426 ALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLS 268
+LV L+ G+ +FC ++ H + T+ + ++ S K+G + G L+
Sbjct: 1162 SLVNLVMAVGISVEFCSHLVHSFATSKSVSQIDRAADSLSKMGSSIFSGITLT 1214
>AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein
protein.
Length = 1287
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 426 ALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLS 268
+LV L+ G+ +FC ++ H + T+ + ++ S K+G + G L+
Sbjct: 1162 SLVNLVMAVGISVEFCSHLVHSFATSKSVSQIDRAADSLSKMGSSIFSGITLT 1214
>AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA
protein.
Length = 1287
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 426 ALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLS 268
+LV L+ G+ +FC ++ H + T+ + ++ S K+G + G L+
Sbjct: 1162 SLVNLVMAVGISVEFCSHLVHSFATSKSVSQIDRAADSLSKMGSSIFSGITLT 1214
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,311,333
Number of Sequences: 53049
Number of extensions: 985761
Number of successful extensions: 3214
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3208
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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