Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K19
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 50 3e-06
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 48 8e-06
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 47 2e-05
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 45 7e-05
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 35 0.080
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 31 0.98
Z78239-4|CAI79141.2| 301|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF024494-8|ABQ13073.1| 256|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 28 6.9
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD+V E + + L+ +G+ + + Y STT ++ + V V RGVRQGDP
Sbjct: 469 KAFDSVEPEDVWDSLQQQGVQRGYINLLQECYTDCSTTFTPFHK-NVTVPVTRGVRQGDP 527
Query: 273 LSPILFNVVMDLILASL 223
+SP LF+ ++ + L
Sbjct: 528 ISPNLFSACLEHVFRQL 544
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFDTV H+A+ + L +G + + Y +T + + V V +GVRQGDP
Sbjct: 524 KAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNFTPFHRPVA-VPVTKGVRQGDP 582
Query: 273 LSPILFNVVMDLILASL 223
+SP LF+ ++ + L
Sbjct: 583 ISPNLFSACLEHVFRKL 599
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD+V H+A+ + L +G E + + Y +T + V V +GVRQGDP
Sbjct: 46 KAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNFTPFLRPIT-VPVTKGVRQGDP 104
Query: 273 LSPILFNVVMDLILASL 223
+SP LF+ ++ + L
Sbjct: 105 ISPNLFSACLEHVFRKL 121
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD+V H+A+ + L +G + + Y +T + + V V +GVRQGDP
Sbjct: 695 KAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNFTPFHRPVA-VPVTKGVRQGDP 753
Query: 273 LSPILFNVVMDLILASL 223
+SP LF+ ++ + L
Sbjct: 754 ISPNLFSACLEHVFRKL 770
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD+V H+A+ + L +G + + Y +T + + V V +GVRQGDP
Sbjct: 434 KAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNFTPFHRPVA-VPVTKGVRQGDP 492
Query: 273 LSPILFNVVMDLILASL 223
+SP LF+ ++ + L
Sbjct: 493 ISPNLFSACLEHVFRKL 509
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPV-KVGRGVRQGD 277
KAFD V+H L++ L G+ FC + + + ++ VNN + + + GV +G
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 276 PLSPILFNVVMDLILASLPERV 211
P LF + ++ +L S+P +
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSI 83
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = -3
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDP 274
KAFD + H+ L++ L + ++ S + + +SS GV QG
Sbjct: 23 KAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAV 82
Query: 273 LSPILFNVVMDLILASLPERV 211
LSP+LF + ++ I + LPE+V
Sbjct: 83 LSPLLFGIYVNDISSILPEKV 103
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 34.7 bits (76), Expect = 0.080
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 772 AEMFNAWMARGENPEILRQCRTVFVPKVEK-PGGPGEYRPISITSIPLRHFHSXLARRLL 596
A ++N ++ P+ ++ + +PK +K P YRPIS+ S + + +R+
Sbjct: 368 AYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAILKRIK 427
Query: 595 ASCPPDARQRGF 560
S A Q GF
Sbjct: 428 NSIESPAHQHGF 439
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 31.1 bits (67), Expect = 0.98
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Frame = +3
Query: 288 EPLVPLLQGCSFHCSRLRWWTPYRIGEQCSRRTVRACPSTSA----IRQVPRETL--CQM 449
+P P Q C C + + QC + + C A +Q ++ + CQ
Sbjct: 406 QPSAPQCQQCQNTCQQFAPVCEQQCAPQCYQPSAPQCQQCQASCQQTQQCQQQCIPQCQQ 465
Query: 450 PWAKSSTAT*HSRSFFLLSPSTASSTAEFSSVPSAQINPRCRAS 581
P A + F +++P + E S SAQ P+C+ S
Sbjct: 466 PSAPQCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQS 509
>Z78239-4|CAI79141.2| 301|Caenorhabditis elegans Hypothetical
protein C30G7.3 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 223 QGSQDEVHHHVEEYRRQRVPLTNPSSHFYRAAHFIVH 333
Q D+V + R++RV +NP + AHFI+H
Sbjct: 263 QEIDDDVKDFNCQMRQRRVKASNPGGTVTKVAHFIIH 299
>AF024494-8|ABQ13073.1| 256|Caenorhabditis elegans Hypothetical
protein C38C3.3 protein.
Length = 256
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 223 QGSQDEVHHHVEEYRRQRVPLTNPSSHFYRAAHFIVH 333
Q D+V + R +RV +NP+ + AHFI+H
Sbjct: 218 QEIDDDVKDFNWQMRERRVKASNPAGTATKVAHFIIH 254
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 87 SAYRHSPQQRWTPASLPSTPQAGLGRQHRPER 182
SAY+ WTP+ PST AG R R
Sbjct: 34 SAYKSRKYSTWTPSPQPSTMNAGTQTDFRTAR 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,670,016
Number of Sequences: 27780
Number of extensions: 465586
Number of successful extensions: 1418
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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