Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_K14
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    32   0.43 
Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical pr...    31   0.75 
AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    30   2.3  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    30   2.3  

>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = +2

Query: 500 AXSGGXVGGGXAXGRAXGXTXVAXXGPAXXWGVPGXP 610
           A  GG  GGG A G   G T     GP    G PG P
Sbjct: 95  AGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKP 131


>Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical
           protein Y48E1B.1 protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 597 TPQXXAGPXXATXVXPXALPXAXPPPTXPP 508
           +PQ  A P   T + P   P A PPP  PP
Sbjct: 335 SPQPAATPVEITEIPPIISPPAPPPPPPPP 364


>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
 Frame = -3

Query: 609 GXPGTPQXXAGPXXATXVX-------PXALPXAXPPPTXPPLXAXQRSSLXKA 472
           G PG+P+    P  A  +        P   P   PPP  PP+   Q+S L ++
Sbjct: 759 GAPGSPRLPPKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPPMLPPQQSQLAQS 811


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
 Frame = -3

Query: 609 GXPGTPQXXAGPXXATXVX-------PXALPXAXPPPTXPPLXAXQRSSLXKA 472
           G PG+P+    P  A  +        P   P   PPP  PP+   Q+S L ++
Sbjct: 658 GAPGSPRLPPKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPPMLPPQQSQLAQS 710


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,517,426
Number of Sequences: 27780
Number of extensions: 115990
Number of successful extensions: 422
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)