Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K12
(821 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 203 2e-53
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 147 1e-36
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 136 3e-33
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 120 2e-28
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 116 3e-27
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 116 5e-27
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 101 9e-23
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 95 1e-20
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 61 2e-10
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 26 5.6
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 203 bits (496), Expect = 2e-53
Identities = 97/210 (46%), Positives = 135/210 (64%)
Frame = -1
Query: 680 PHVFCTAYKKNRFYLFSKRSPDDVKXPDNDRDIFNEKPSKEDIISATEGQGVQRIYEQAV 501
P +F TA+KK RFYLFS S K +DRD++NE+ + G + + A+
Sbjct: 402 PTLFATAWKKQRFYLFSNMS---TKFTLSDRDVYNEQVLPVTNNEGRQENGNILLGKAAI 458
Query: 500 IHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRVIKGFMVQXXXXXXXXXXGE 321
IHTT GDI ++++ ++ PK +NF HA NGYY+ IFHR+IK FM+Q GE
Sbjct: 459 IHTTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGE 518
Query: 320 SIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTRG 141
SIW +F DE +LKHDRP+T+SMAN+GP+TNGSQFFIT TPWLD KHT+F R G
Sbjct: 519 SIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAG 578
Query: 140 MEVVQNIGAAKTNPKTDKPYDDIRILSLSV 51
++VV I +T+ K D+P + +I+++S+
Sbjct: 579 LDVVHRIEQGETD-KYDRPLEPTKIINISI 607
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 147 bits (357), Expect = 1e-36
Identities = 69/146 (47%), Positives = 96/146 (65%)
Frame = -1
Query: 500 IHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRVIKGFMVQXXXXXXXXXXGE 321
+ T+LG I + ++ + PKT +NF A+ GYY+G IFHRVI F++Q G
Sbjct: 6 LQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 320 SIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTRG 141
SI+G +F DE + L H LSMANAGP+TN SQFFITLAPTPWLD KHT+FGRV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 140 MEVVQNIGAAKTNPKTDKPYDDIRIL 63
+ V + +G +T+ +D+P + ++I+
Sbjct: 126 LSVCKRMGLIRTD-SSDRPIEPLKII 150
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 136 bits (330), Expect = 3e-33
Identities = 74/146 (50%), Positives = 92/146 (63%), Gaps = 4/146 (2%)
Frame = -1
Query: 488 LGDIHVRIFGKDVPKTAENFCVHA--RNGY-YNGHIFHRVIKGFMVQXXXXXXXXXXG-E 321
LG + + +FGK VPKTAENF A G+ Y G IFHRVI FM+Q G +
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGK 99
Query: 320 SIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTRG 141
SI+G F DE L H RP LSMANAGPD+NGSQFFIT TPWLD H VFG V G
Sbjct: 100 SIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSG 158
Query: 140 MEVVQNIGAAKTNPKTDKPYDDIRIL 63
++V+ I A+T+ + DKP +D++I+
Sbjct: 159 YDIVKKISKAETDNR-DKPLEDVKII 183
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 120 bits (290), Expect = 2e-28
Identities = 68/133 (51%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Frame = -1
Query: 488 LGDIHVRIFGKDVPKTAENF---CVHARNGYYNGHIFHRVIKGFMVQXXXXXXXXXXG-E 321
LG I ++F VPKTA NF C + Y G FHRVI FM+Q G +
Sbjct: 15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGK 74
Query: 320 SIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTRG 141
SI+G +F DE A LKH++P LSMANAGP+TNGSQFFIT TPWLD KH VFG VT G
Sbjct: 75 SIYGEKFPDENFA-LKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEG 133
Query: 140 MEVVQNIGAAKTN 102
M+VV+ + + +N
Sbjct: 134 MDVVKKVESLGSN 146
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 116 bits (280), Expect = 3e-27
Identities = 64/147 (43%), Positives = 79/147 (53%)
Frame = -1
Query: 506 AVIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRVIKGFMVQXXXXXXXXXX 327
A I T G+I++ + P NF A+ GYY IFHR I FM+Q
Sbjct: 278 ARIVTNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRG 337
Query: 326 GESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVT 147
G+SIWG F DEF LKHD +SMAN G +TNGSQFFI P LDNKHT+FGRV
Sbjct: 338 GQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVV 397
Query: 146 RGMEVVQNIGAAKTNPKTDKPYDDIRI 66
G+ V+ + TN D P I++
Sbjct: 398 GGLNVLDALEKVPTN-SNDHPKLPIKL 423
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 116 bits (278), Expect = 5e-27
Identities = 69/141 (48%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Frame = -1
Query: 479 IHVRIFGKDVPKTAENFCVHARNGY--------YNGHIFHRVIKGFMVQXXXXXXXXXXG 324
I+ +F VPKT +NF NG+ Y G FHRVIK FM+Q G
Sbjct: 19 IYFELFDNVVPKTVKNFASLC-NGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTG 77
Query: 323 -ESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVT 147
ESI+G +F DE LKHD+P+ LSMANAGP+TNGSQFFIT PTP LD KH VFG+V
Sbjct: 78 GESIYGEKFEDE-NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVI 136
Query: 146 RGMEVVQNIGAAKTNPKTDKP 84
+G V+ I +T K D P
Sbjct: 137 QGKSTVRTIENLET--KNDDP 155
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 101 bits (243), Expect = 9e-23
Identities = 61/152 (40%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Frame = -1
Query: 488 LGDIHVRIFGKDVPKTAENF---CVHARNGY------YNGHIFHRVIKGFMVQXXXXXXX 336
LG I +R+F VPKTAENF C G Y FHR+I+GFM+Q
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSG 77
Query: 335 XXXGES-IWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVF 159
G + I+ + LKHDRP LSMANAG D+NG QFFIT P +LD KH VF
Sbjct: 78 DGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVF 137
Query: 158 GRVTRGMEVVQNIGAAKTNPKTDKPYDDIRIL 63
G V G ++V+ I + + +P ++ I+
Sbjct: 138 GEVIEGYDIVKEIESTPVGANS-RPKSNVAIV 168
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 95.1 bits (226), Expect = 1e-20
Identities = 50/118 (42%), Positives = 66/118 (55%)
Frame = -1
Query: 503 VIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRVIKGFMVQXXXXXXXXXXG 324
++ TT GDI + ++ K+VPK NF GYY+G I HRV+ F++Q G
Sbjct: 16 ILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMGG 75
Query: 323 ESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRV 150
ESI+G FA E L+ R + MA + N SQFFITL PTP + K T+FGRV
Sbjct: 76 ESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRV 133
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 61.3 bits (142), Expect = 2e-10
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Frame = -1
Query: 503 VIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRVIKGFMVQ-XXXXXXXXXX 327
+I TT+GD+ + +F K+ PKT ENF + YYN F+ + + Q
Sbjct: 4 LIETTVGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNIQHNYTCQTGDPLGPTGDG 63
Query: 326 GESIWG----GE--FADEFRAHLKHDRPYTLSMANAGPDTN-------GSQFFITLAPT- 189
G +W G F EF L H++ +SM+ A + GSQF ITL+
Sbjct: 64 GRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNL 123
Query: 188 PWLDNKHTVFGRVTRGMEVVQNIGAAKTNPKTDKPYDDIRI 66
LD ++ ++G+V G + + I A + + +PY DIRI
Sbjct: 124 EGLDERYPIYGQVAEGFDTLLKINDAICD-EEGQPYRDIRI 163
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 572 KPSKEDIISATEGQGVQRIYEQAVIHTTLGDIHVR 468
KP D S++ G ++ YE+ + T+ G IHVR
Sbjct: 776 KPDMFDTTSSSGGSQLESAYEETKVPTSYG-IHVR 809
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,937,968
Number of Sequences: 5004
Number of extensions: 32329
Number of successful extensions: 117
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -