Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K09
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683... 266 2e-71
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711... 54 1e-07
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800... 32 0.59
02_01_0487 + 3503003-3503037,3505802-3505833,3506012-3506127,350... 30 1.8
01_06_0731 - 31555078-31555082,31555750-31555857,31555948-315561... 29 4.2
04_01_0376 - 4929447-4929731 29 5.5
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544... 28 7.3
02_05_0452 + 29127686-29128078,29128155-29128242,29129287-291294... 28 7.3
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 28 7.3
11_04_0354 + 16697571-16700256,16700335-16700759 28 9.7
05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033 28 9.7
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 28 9.7
>07_03_0405 -
17767303-17767665,17767815-17768039,17768115-17768342,
17768607-17768621,17768622-17768810,17769106-17769213,
17769917-17770045
Length = 418
Score = 266 bits (651), Expect = 2e-71
Identities = 130/206 (63%), Positives = 148/206 (71%)
Frame = -3
Query: 751 NTXVVIRTPET*FGSIARTTFPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHH 572
NT VVI G + PRVGDFNES YYMEGNTGHPVF T YGKI VNIC+GRHH
Sbjct: 206 NTAVVIGNHGNIIGIHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIGVNICYGRHH 265
Query: 571 VLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPN 392
LNW+ FG NGAEIVFNPSAT+ GE SE MW +EARNAAI N YF +INRVG E FPN
Sbjct: 266 PLNWLAFGLNGAEIVFNPSATV-GEL-SEPMWPIEARNAAIANSYFVGSINRVGTEVFPN 323
Query: 391 EFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCY 212
FTS DGKP H D G FYGSS+F PD P LSR RDGL+I+ +DLNL RQI+D+ +
Sbjct: 324 PFTSGDGKPQHADFGHFYGSSHFSAPDASCTPSLSRYRDGLMISDMDLNLCRQIKDKWGF 383
Query: 211 YMTQRLDMYVNSLSKVLELDYKPQVV 134
MT R D Y + LS+ L+ D+KPQV+
Sbjct: 384 RMTARYDTYASLLSEYLKPDFKPQVI 409
>02_04_0096 +
19669428-19669525,19670770-19670818,19671041-19671132,
19671235-19671386,19671478-19671524,19671617-19671650,
19671769-19671935,19672070-19672166,19672239-19672408
Length = 301
Score = 54.0 bits (124), Expect = 1e-07
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 6/195 (3%)
Frame = -3
Query: 751 NTXVVIRTPET*FGSIARTTFPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHH 572
N+ +I T G ++ P + E Y+ G+TG F T+Y I V IC+ +
Sbjct: 106 NSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWF 165
Query: 571 VLNWMMFGQNGAEIVFNPSATIAGEG-----GSEYMWNVEARNAAITNCYFTAAINRVGY 407
GAEI+F P+A I E S W + A N A NR+G
Sbjct: 166 PECARAMVLQGAEILFYPTA-IGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGR 224
Query: 406 EEFPNEFTSADGKPAHKDLGL-FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQI 230
E E H + + F+G+S+ GP G + + +L+A DL+ +
Sbjct: 225 ETVETE---------HGESTITFFGNSFIAGPTGEIVKLANDKDEDVLVAEFDLDEIKST 275
Query: 229 RDRRCYYMTQRLDMY 185
R + +R D+Y
Sbjct: 276 RHGWGIFRDRRPDLY 290
>02_05_0058 +
25478274-25478421,25478963-25479142,25479714-25480007,
25480261-25480564,25480672-25480751,25480765-25480934
Length = 391
Score = 31.9 bits (69), Expect = 0.59
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Frame = -3
Query: 631 PVFATRYGKIAVNICF-GRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNA 455
PV+ T GKI IC+ R +L M+ + G +I P+A + W +
Sbjct: 178 PVYDTPIGKIGAVICWENRMPLLRTAMYAK-GVQIYCAPTADFSPS------WQASMTHI 230
Query: 454 AITNCYFTAAIN----RVGYEEFPN-EFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGL 290
A+ F + N R Y P F D +P+ + + ++ G S P G G
Sbjct: 231 AVEGGCFVLSANQFCRRKNYPPAPEYTFGGLDEEPSPESV-IWPGGSSIVSPSGTVLAGP 289
Query: 289 SRTRDGLLIA 260
+ +GLL A
Sbjct: 290 NYEGEGLLTA 299
>02_01_0487 +
3503003-3503037,3505802-3505833,3506012-3506127,
3506227-3506437,3506555-3506792,3507075-3507252,
3507962-3508079,3508167-3508373,3509134-3509234
Length = 411
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 526 FNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLG 347
F+PS I GEGG ++ + RN + + +R G +EF NE A +H++L
Sbjct: 45 FSPSNKI-GEGGFGSVYKGKLRNGKLVAVKVLSLESRQGAKEFLNEL-MAISNVSHENLV 102
Query: 346 LFYG 335
YG
Sbjct: 103 KLYG 106
>01_06_0731 -
31555078-31555082,31555750-31555857,31555948-31556166,
31556320-31556415,31557264-31557387
Length = 183
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 617 GREY-RMAGVTFHVVVGFVKIADSRKCGSCDAS---ESRFRCPNDNRSVQSM 760
GR Y R AG T ++ F + + + C CD S ES RCPN R++ +
Sbjct: 49 GRFYCRNAGDTPRLL--FSSVVNDKICDCCDGSDEYESGIRCPNTCRNINDV 98
>04_01_0376 - 4929447-4929731
Length = 94
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 601 RSCRIWSRIQDGRCYLPCSSW 663
RSC W +Q GRC CS+W
Sbjct: 63 RSCAAW--LQQGRCSAGCSAW 81
>04_03_1018 +
21753634-21753640,21754282-21754315,21754413-21754432,
21754485-21755782
Length = 452
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 269 QAVSGAGQTGAPNAVGAAEVARSVEQAQVFVCRFPVSRSELVRELLVADSVDGRCEVAV 445
+ SG P+A+ A E + E ++ V R P LVR + + +S + E AV
Sbjct: 342 KCASGGCAGAVPSALAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAV 400
>02_05_0452 +
29127686-29128078,29128155-29128242,29129287-29129419,
29129506-29130178
Length = 428
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 619 SRIQDGRCYLPCSSWIR*NRRLSEMWFLRCFRITFPVS**QPXCSKY-VECF 771
+R Q C C SW + + + C RITFP+S QP ++ V+CF
Sbjct: 92 ARRQVVACAAVCRSWREVTKEVVKT-LEECGRITFPISLKQPGPREHPVQCF 142
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 548 SEHHPVQDVVPSE-ADVHRDLAVSGREYRMAGVTFHVVV 661
+E HP+ DV+PSE +V D + R MAG H +V
Sbjct: 282 AEVHPIDDVMPSEVVEVKVDDEETNRTDEMAGDGDHAMV 320
>11_04_0354 + 16697571-16700256,16700335-16700759
Length = 1036
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 200 LGHVITTSVSDLSVQVQVHGRD*QAVSGAGQTGAPNAVG 316
LG V+ TSVS+LS Q+Q+ +SG G N VG
Sbjct: 331 LGGVLPTSVSNLSAQLQLLYVGFNKISGNIPFGISNLVG 369
>05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033
Length = 143
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 260 GRGLEPEQTDQRQTLLLHDPTPGHVREQSQQSTRAGLQ 147
G+G EP+ D ++ L ++D PG E Q S+ AGL+
Sbjct: 89 GKGHEPDWRDLQELLRIYD--PGTSTECKQASSGAGLR 124
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +2
Query: 284 AGQTGAPNAVGAAEVA-----RSVEQAQVFVCRFPVSRSELVRELL------VADSVDGR 430
A + PNA+ AAE+ S+ Q ++ + E + E L +A+ R
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIANKYLSR 184
Query: 431 CEVAVRDSCVPSF--NVPHVLAAAFSGDRR 514
+++ C P + +PH +A AFSG+RR
Sbjct: 185 SHLSI--DCRPDWMTRIPHYIAVAFSGERR 212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,981,754
Number of Sequences: 37544
Number of extensions: 447161
Number of successful extensions: 1326
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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