Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K09
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 258 2e-69
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.2
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 29 3.8
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 29 3.8
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.0
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 258 bits (633), Expect = 2e-69
Identities = 121/208 (58%), Positives = 143/208 (68%)
Frame = -3
Query: 751 NTXVVIRTPET*FGSIARTTFPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHH 572
NT VVI G + PRVGDFNES YYME GHPVF T+YG+I +NIC+GRHH
Sbjct: 181 NTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHH 240
Query: 571 VLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPN 392
NWMM+ NGAEI+FNPSAT+ SE +W +EARNAAI N FT INRVG E FPN
Sbjct: 241 PQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTEVFPN 298
Query: 391 EFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCY 212
EFTS +G+PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +D +
Sbjct: 299 EFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKDAWGF 358
Query: 211 YMTQRLDMYVNSLSKVLELDYKPQVVHE 128
MT RLDMY +++V DY+P + E
Sbjct: 359 RMTNRLDMYAQKITEVSNPDYRPDIRRE 386
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +2
Query: 464 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEADVHRDLAVSGREYRMAGV 643
SFNV + + G++R + + ++ + +H +QD+ P+ + RD + ++AG+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPF-MSRDELIDNSVRKLAGM 79
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = -3
Query: 721 T*FGSIARTTFPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQN 542
T +GS R +P GD Y M GH + R G+ H L ++ G N
Sbjct: 248 TYYGSWMRDAYPPTGDDARKRYVMNHFQGHELIEFRNEAEMRRDHVGKVHRLPYIFDGTN 307
Query: 541 GAEIVFNPS 515
++FN S
Sbjct: 308 --HVIFNAS 314
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = -3
Query: 721 T*FGSIARTTFPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQN 542
T +GS R +P GD Y M GH + R G+ H L ++ G N
Sbjct: 248 TYYGSWMRDAYPPTGDDARKRYVMNHFQGHELIEFRNEAEMRRDHVGKVHRLPYIFDGTN 307
Query: 541 GAEIVFNPS 515
++FN S
Sbjct: 308 --HVIFNAS 314
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 178 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 285
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 562 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 398
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 562 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 398
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 562 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 398
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 562 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 398
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,371,081
Number of Sequences: 27780
Number of extensions: 366036
Number of successful extensions: 1057
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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