Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_K06
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 273 8e-74
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 273 8e-74
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 273 8e-74
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 273 8e-74
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 269 2e-72
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 268 4e-72
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 265 3e-71
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 265 3e-71
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 265 3e-71
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 265 3e-71
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 261 5e-70
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 260 8e-70
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 260 8e-70
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 255 3e-68
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 255 3e-68
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 240 7e-64
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 133 2e-31
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 95 7e-20
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 94 9e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 94 9e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 94 1e-19
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 93 3e-19
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 54 2e-07
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 54 2e-07
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.9
U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical p... 29 3.9
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 29 5.1
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 29 5.1
Z70682-9|CAA94587.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z70680-9|CAA94576.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.8
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 28 8.9
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 28 8.9
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 8.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 273 bits (670), Expect = 8e-74
Identities = 130/167 (77%), Positives = 139/167 (83%)
Frame = -2
Query: 629 PXFLPKRXTMNKFSFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAI 450
P ++ + S AEIT M + P HGKYMA C+L+RG+VVPKDVNAAI
Sbjct: 274 PVISAEKAYHEQLSVAEITN-MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 332
Query: 449 XTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 270
TIK KR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLD
Sbjct: 333 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 392
Query: 269 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP +P I AEKAYHEQ+ + + P NQMVKCDP
Sbjct: 263 PRIHFPLATFSPVISAEKAYHEQLSV-AEITNMCFEPHNQMVKCDP 307
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 273 bits (670), Expect = 8e-74
Identities = 130/167 (77%), Positives = 139/167 (83%)
Frame = -2
Query: 629 PXFLPKRXTMNKFSFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAI 450
P ++ + S AEIT M + P HGKYMA C+L+RG+VVPKDVNAAI
Sbjct: 273 PVISAEKAYHEQLSVAEITN-MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 331
Query: 449 XTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 270
TIK KR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLD
Sbjct: 332 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 391
Query: 269 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 392 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 438
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP +P I AEKAYHEQ+ + + P NQMVKCDP
Sbjct: 262 PRIHFPLATFSPVISAEKAYHEQLSV-AEITNMCFEPHNQMVKCDP 306
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 273 bits (670), Expect = 8e-74
Identities = 130/167 (77%), Positives = 139/167 (83%)
Frame = -2
Query: 629 PXFLPKRXTMNKFSFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAI 450
P ++ + S AEIT M + P HGKYMA C+L+RG+VVPKDVNAAI
Sbjct: 274 PVISAEKAYHEQLSVAEITN-MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 332
Query: 449 XTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 270
TIK KR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLD
Sbjct: 333 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 392
Query: 269 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP +P I AEKAYHEQ+ + + P NQMVKCDP
Sbjct: 263 PRIHFPLATFSPVISAEKAYHEQLSV-AEITNMCFEPHNQMVKCDP 307
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 273 bits (670), Expect = 8e-74
Identities = 130/167 (77%), Positives = 139/167 (83%)
Frame = -2
Query: 629 PXFLPKRXTMNKFSFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAI 450
P ++ + S AEIT M + P HGKYMA C+L+RG+VVPKDVNAAI
Sbjct: 274 PVISAEKAYHEQLSVAEITN-MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 332
Query: 449 XTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 270
TIK KR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLD
Sbjct: 333 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 392
Query: 269 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP +P I AEKAYHEQ+ + + P NQMVKCDP
Sbjct: 263 PRIHFPLATFSPVISAEKAYHEQLSV-AEITNMCFEPHNQMVKCDP 307
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 269 bits (659), Expect = 2e-72
Identities = 126/169 (74%), Positives = 142/169 (84%), Gaps = 2/169 (1%)
Frame = -2
Query: 629 PXFLPKRXTMNKFSFAEITKRMX--GAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNA 456
P ++ + + AEIT++ GA + P GKYMACC+LYRG+VVPKDVNA
Sbjct: 279 PIISAEKAYHEQMTVAEITQQCFEPGAQMVK---CDPRRGKYMACCLLYRGDVVPKDVNA 335
Query: 455 AIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 276
AI ++K KR+IQFVDWCPTGFKVGINYQPPTVVPG DL+K+QRAVCMLSNTTAIAEAWAR
Sbjct: 336 AIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWAR 395
Query: 275 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D+
Sbjct: 396 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA 444
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP AP I AEKAYHEQ+ + Q P QMVKCDP
Sbjct: 268 PRIHFPLTTYAPIISAEKAYHEQMTVAEITQ-QCFEPGAQMVKCDP 312
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 268 bits (656), Expect = 4e-72
Identities = 118/133 (88%), Positives = 128/133 (96%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P +GKYMACC+LYRG+VVPK++N+AI TIK KR IQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
D+AK+QRAVCMLSNTTAI EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+A
Sbjct: 367 DMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMA 426
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG+DS
Sbjct: 427 ALEKDYEEVGVDS 439
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHV-XSPPNQMVKCDP 526
P +FP V AP I AEKAYHEQ L T+V P +QMVKCDP
Sbjct: 263 PRIHFPLVTYAPIISAEKAYHEQ--LSVSEITNVCFEPGSQMVKCDP 307
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 265 bits (649), Expect = 3e-71
Identities = 120/133 (90%), Positives = 125/133 (93%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P HGKYMA C+LYRG+VVPKDVN AI IK KRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 305 PRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLA
Sbjct: 365 DLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLA 424
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG DS
Sbjct: 425 ALEKDYEEVGADS 437
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP P I AEKAYHE + + D P NQMVKCDP
Sbjct: 261 PRIHFPLAAYTPLISAEKAYHEALSV-SDITNSCFEPANQMVKCDP 305
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 265 bits (649), Expect = 3e-71
Identities = 120/133 (90%), Positives = 125/133 (93%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P HGKYMA C+LYRG+VVPKDVN AI IK KRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 305 PRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLA
Sbjct: 365 DLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLA 424
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG DS
Sbjct: 425 ALEKDYEEVGADS 437
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP P I A+KAYHE + + D P NQMVKCDP
Sbjct: 261 PRIHFPLAAYTPLISADKAYHEALSV-NDITNSCFEPANQMVKCDP 305
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 265 bits (649), Expect = 3e-71
Identities = 120/133 (90%), Positives = 125/133 (93%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P HGKYMA C+LYRG+VVPKDVN AI IK KRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 305 PRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLA
Sbjct: 365 DLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLA 424
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG DS
Sbjct: 425 ALEKDYEEVGADS 437
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP P I A+KAYHE + + D P NQMVKCDP
Sbjct: 261 PRIHFPLAAYTPLISADKAYHEALSV-NDITNSCFEPANQMVKCDP 305
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 265 bits (649), Expect = 3e-71
Identities = 120/133 (90%), Positives = 125/133 (93%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P HGKYMA C+LYRG+VVPKDVN AI IK KRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 305 PRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLA
Sbjct: 365 DLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLA 424
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG DS
Sbjct: 425 ALEKDYEEVGADS 437
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP P I AEKAYHE + + D P NQMVKCDP
Sbjct: 261 PRIHFPLAAYTPLISAEKAYHEALSV-SDITNSCFEPANQMVKCDP 305
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 261 bits (639), Expect = 5e-70
Identities = 121/154 (78%), Positives = 133/154 (86%)
Frame = -2
Query: 590 SFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVD 411
S EITK A + P HGKYMA C+LYRG+VVPKDV+AAI +IK +R++QFVD
Sbjct: 282 SVDEITKSCFEA-SNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVD 340
Query: 410 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 231
WCPTGFKVG+NYQPPTV+PGGD+AKV RAVCMLSNTTAIAEAW RLD+KFDLMYAKRAFV
Sbjct: 341 WCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFV 400
Query: 230 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 401 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 260 bits (637), Expect = 8e-70
Identities = 117/133 (87%), Positives = 125/133 (93%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P +GKYMA C+LYRG+VVPKDVN AI IK KR++QFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 305 PRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGG 364
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLA
Sbjct: 365 DLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLA 424
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG DS
Sbjct: 425 ALEKDYEEVGADS 437
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP P I AEKAYHE + + D P NQMVKCDP
Sbjct: 261 PRIHFPLASYTPLISAEKAYHEALSV-NDITNSCFEPANQMVKCDP 305
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 260 bits (637), Expect = 8e-70
Identities = 117/133 (87%), Positives = 125/133 (93%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P +GKYMA C+LYRG+VVPKDVN AI IK KR++QFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 305 PRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGG 364
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLA
Sbjct: 365 DLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLA 424
Query: 167 ALEKDYEEVGMDS 129
ALEKDYEEVG DS
Sbjct: 425 ALEKDYEEVGADS 437
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP P I AEKAYHE + + D P NQMVKCDP
Sbjct: 261 PRIHFPLASYTPLISAEKAYHEALSV-NDITNSCFEPANQMVKCDP 305
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 255 bits (624), Expect = 3e-68
Identities = 111/132 (84%), Positives = 122/132 (92%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P GKYMA C+LYRG+VVPKD+N+AI +K KRT+QFV+WCPTGFKVGINYQPPTVVPGG
Sbjct: 313 PRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGG 372
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DL K R+VCM+SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+A
Sbjct: 373 DLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMA 432
Query: 167 ALEKDYEEVGMD 132
ALEKDYEE+G D
Sbjct: 433 ALEKDYEEIGED 444
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPN-QMVKCDP 526
P +FP V AP + AE+A HEQ + TH P QMVKCDP
Sbjct: 269 PRIHFPLVTYAPLVSAERASHEQNTV--SDMTHACFEPGYQMVKCDP 313
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 255 bits (624), Expect = 3e-68
Identities = 111/132 (84%), Positives = 122/132 (92%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P GKYMA C+LYRG+VVPKD+N+AI +K KRT+QFV+WCPTGFKVGINYQPPTVVPGG
Sbjct: 285 PRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGG 344
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DL K R+VCM+SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+A
Sbjct: 345 DLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMA 404
Query: 167 ALEKDYEEVGMD 132
ALEKDYEE+G D
Sbjct: 405 ALEKDYEEIGED 416
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPN-QMVKCDP 526
P +FP V AP + AE+A HEQ + TH P QMVKCDP
Sbjct: 241 PRIHFPLVTYAPLVSAERASHEQNTV--SDMTHACFEPGYQMVKCDP 285
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 240 bits (588), Expect = 7e-64
Identities = 109/133 (81%), Positives = 117/133 (87%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P GKYMA C+LYRG+VVPKDVNAAI ++K KR I FVDWCPTGFKVGINYQ P V GG
Sbjct: 310 PSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGG 369
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
DLAKV RAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHW+VGEGMEEGEF EAR+DLA
Sbjct: 370 DLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLA 429
Query: 167 ALEKDYEEVGMDS 129
ALEKDY EV D+
Sbjct: 430 ALEKDYAEVSRDT 442
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -1
Query: 663 PVSNFPXVXXAPXIFAEKAYHEQVFLRRDHQTHVXSPPNQMVKCDP 526
P +FP AP I A++A+HE + + +D NQMVKCDP
Sbjct: 266 PRIHFPLATYAPVISADRAHHEPLSV-QDITHMCFEKANQMVKCDP 310
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 133 bits (321), Expect = 2e-31
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = -2
Query: 323 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
VCMLS+TTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEE
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
Query: 143 VGMDS 129
VG DS
Sbjct: 70 VGADS 74
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 94.7 bits (225), Expect = 7e-20
Identities = 46/146 (31%), Positives = 80/146 (54%)
Frame = -2
Query: 581 EITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCP 402
E+T++M A + P HG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMFDA-KNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIP 346
Query: 401 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 222
K + PP V+ A + N+TAI E + R+ +F M+ ++AF+HWY
Sbjct: 347 NNVKTAVCDIPPR--------GVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398
Query: 221 VGEGMEEGEFSEAREDLAALEKDYEE 144
GEGM+E EF+EA ++ L +Y++
Sbjct: 399 TGEGMDEMEFTEAESNMNDLVSEYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 94.3 bits (224), Expect = 9e-20
Identities = 42/128 (32%), Positives = 72/128 (56%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P HG+Y+ ++RG + K+V+ + I+ K + FVDW P K + PP
Sbjct: 305 PRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPR----- 359
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 360 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 167 ALEKDYEE 144
L +Y++
Sbjct: 417 DLVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 94.3 bits (224), Expect = 9e-20
Identities = 42/128 (32%), Positives = 72/128 (56%)
Frame = -2
Query: 527 PXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWCPTGFKVGINYQPPTVVPGG 348
P HG+Y+ ++RG + K+V+ + I+ K + FVDW P K + PP
Sbjct: 305 PRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPR----- 359
Query: 347 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 168
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 360 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 167 ALEKDYEE 144
L +Y++
Sbjct: 417 DLVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/147 (30%), Positives = 82/147 (55%)
Frame = -2
Query: 584 AEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWC 405
AE+T++M A + P HG+Y+ ++RG + ++V+ + +++ K + FV+W
Sbjct: 287 AELTQQMFDA-KNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWI 345
Query: 404 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 225
P K + PP ++ A + N+TAI E + R+ +F M+ ++AF+HW
Sbjct: 346 PNNVKTAVCDIPPR--------GLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
Query: 224 YVGEGMEEGEFSEAREDLAALEKDYEE 144
Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 93.5 bits (222), Expect = 2e-19
Identities = 45/147 (30%), Positives = 81/147 (55%)
Frame = -2
Query: 584 AEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWC 405
AE+T++M A + P HG+Y+ ++RG + ++V+ + ++ K + FV+W
Sbjct: 287 AELTQQMFDA-KNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWI 345
Query: 404 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 225
P K + PP ++ A + N+TAI E + R+ +F M+ ++AF+HW
Sbjct: 346 PNNVKTAVCDIPPR--------GLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
Query: 224 YVGEGMEEGEFSEAREDLAALEKDYEE 144
Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 92.7 bits (220), Expect = 3e-19
Identities = 44/147 (29%), Positives = 81/147 (55%)
Frame = -2
Query: 584 AEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFVDWC 405
AE+T++M A + P HG+Y+ ++RG + ++V+ + ++ K + FV+W
Sbjct: 287 AELTQQMFDA-KNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWI 345
Query: 404 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 225
P K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HW
Sbjct: 346 PNNVKTAVCDIPPR--------GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
Query: 224 YVGEGMEEGEFSEAREDLAALEKDYEE 144
Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 53.6 bits (123), Expect = 2e-07
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -2
Query: 593 FSFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFV 414
FS +++T+++ A N GK+++ ++YRG K I +++ + + +
Sbjct: 283 FSISDLTQQVLDAKNIMTCNHN--QGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMI 340
Query: 413 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 234
+ P + +P L + + ++N+TAI E R+ +F ++ ++AF
Sbjct: 341 ESLPKSTNTDV-----CDIPSRGL---KTSATFIANSTAIQEPLKRISKQFAGLFRRKAF 392
Query: 233 VHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 141
+HWY MEE EF++A DL + + YE+V
Sbjct: 393 LHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 53.6 bits (123), Expect = 2e-07
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -2
Query: 593 FSFAEITKRMXGAXQTRW*NATPXHGKYMACCMLYRGNVVPKDVNAAIXTIKXKRTIQFV 414
FS +++T+++ A N GK+++ ++YRG K I +++ + + +
Sbjct: 283 FSISDLTQQVLDAKNIMTCNHN--QGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMI 340
Query: 413 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 234
+ P + +P L + + ++N+TAI E R+ +F ++ ++AF
Sbjct: 341 ESLPKSTNTDV-----CDIPSRGL---KTSATFIANSTAIQEPLKRISKQFAGLFRRKAF 392
Query: 233 VHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 141
+HWY MEE EF++A DL + + YE+V
Sbjct: 393 LHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 95 STLRLPHPRLQRSPCRLLRNP--SRGQPGPHGLR-RTLPPPYPHRRTS 229
S R P P+ + P R R+P S+ P P + R+ PP P RR S
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRS 442
>U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical
protein C35D10.17 protein.
Length = 102
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 244 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVRE 107
+V CT R+WRR+++P R + R + +K WTP +++E
Sbjct: 43 AVWQCTKKE-RIWRRDNNPAYKRRIVELRSLPEK-YWTPALHKLKE 86
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 57 TVRVRHKRYFIGLVLFGSLTLAFSGVHADF-FVILLEGSQVLTGFGELSLLHTLTDVPVH 233
TV V + IG++L G L L + VH DF + L ++ LTG + + +H
Sbjct: 47 TVAVIAQNLPIGVILAGVLILYITVVHGDFIYRSYLTLNRDLTGLALIIEVKIDLWWRLH 106
Query: 234 ESTLGVHEVEL-VVKASPS 287
++ G+HE+ L +VK +P+
Sbjct: 107 QNK-GIHELFLDIVKKNPN 124
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 81 YFIGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGF 188
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>Z70682-9|CAA94587.2| 460|Caenorhabditis elegans Hypothetical
protein C25G4.1 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 550 WXAPXMRLVISAKENLFMVXLFGKNXGRXXYXWEIGYGG*GPXLXWDPG 696
W M V S +EN F+ +FG N W IG L W PG
Sbjct: 165 WCNGTMVTVSSKEENSFVSRVFGSNDETTRQIW-IGNTESSGYLNWSPG 212
>Z70680-9|CAA94576.2| 460|Caenorhabditis elegans Hypothetical
protein C25G4.1 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 550 WXAPXMRLVISAKENLFMVXLFGKNXGRXXYXWEIGYGG*GPXLXWDPG 696
W M V S +EN F+ +FG N W IG L W PG
Sbjct: 165 WCNGTMVTVSSKEENSFVSRVFGSNDETTRQIW-IGNTESSGYLNWSPG 212
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 268 TSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKST 95
TSSTS PS + ++ + +P P T L S I + P ++ P ST
Sbjct: 360 TSSTSPIPSTTQTSSSAPSTYTSNFTPSPTTTLLTS-TIAPSTQGVPTSSKSSSPNST 416
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 416 VDWCPTGFKVGINY 375
+DWCP +VG+NY
Sbjct: 341 IDWCPQAAEVGVNY 354
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 317 MLSNTTAIAEAWARLDHKFDLMYAKRAFV 231
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 95 STLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYP 214
ST+ L P SPC PS P P+G RR+LPP P
Sbjct: 44 STMLLS-PNFSPSPCPRRSLPST--PLPNGHRRSLPPTPP 80
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 317 MLSNTTAIAEAWARLDHKFDLMYAKRAFV 231
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Frame = +2
Query: 98 TLRLPHP----RLQRSPCRLLRNPSRGQ------PGPHGLRRTL-PPPYPHRRTSAR 235
T R P P R+ RSP R R+P R Q P P +R+ PPP RR +R
Sbjct: 111 TRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSR 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,124,670
Number of Sequences: 27780
Number of extensions: 318004
Number of successful extensions: 1030
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -