Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_J19
         (850 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           25   2.1  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 25.0 bits (52), Expect(2) = 2.1
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +1

Query: 349 PCTRXTSAPXXXTPXRTRXPXPAXATPXXXXPPXP 453
           P T  +  P    P  T  P P  A P    PP P
Sbjct: 42  PPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPP 76



 Score = 23.8 bits (49), Expect(2) = 2.1
 Identities = 12/41 (29%), Positives = 14/41 (34%)
 Frame = +1

Query: 559 PXXXXPPXXXXVPAXPRXXPAXPFPXXXFRAXLPPXAXPXP 681
           P    PP    V + P   P  P P     +  PP   P P
Sbjct: 68  PLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,190,536
Number of Sequences: 37544
Number of extensions: 189591
Number of successful extensions: 681
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)