Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_J13
         (824 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07881-1|CAA30728.1|  309|Homo sapiens proline-rich protein G1 p...    31   3.8  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    31   5.1  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    31   5.1  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    31   5.1  
BC096211-1|AAH96211.1|  309|Homo sapiens PRB3 protein protein.         31   6.7  

>X07881-1|CAA30728.1|  309|Homo sapiens proline-rich protein G1
           protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 26/108 (24%), Positives = 29/108 (26%), Gaps = 1/108 (0%)
 Frame = +3

Query: 291 RXXKXXGPXVQKTGAGXXPPTKXXLVXXKTPPGXXGXGGPPXFFKXXXGXXXPPQNRXXX 470
           R  K  GP  Q       PP +        P G     GPP   +       PPQ     
Sbjct: 158 RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP--RPGKPEGPPPQGGNQS 215

Query: 471 XXXXXXXXXPPXKKXXRXXXXRXXXPXXXPPXXPXPXXXS-PXXPPPP 611
                    P           R   P    P  P P   + P  PPPP
Sbjct: 216 QGPPPRPGKPEGSPSQGGNKPRGPPPHPGKPQGPPPQEGNKPQRPPPP 263


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 24/100 (24%), Positives = 29/100 (29%)
 Frame = +3

Query: 312 PXVQKTGAGXXPPTKXXLVXXKTPPGXXGXGGPPXFFKXXXGXXXPPQNRXXXXXXXXXX 491
           P   + G+G   P +  +V    PP     G PP       G   PP             
Sbjct: 277 PVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPG---PKPGFAPPPA---PPPPPPPMI 330

Query: 492 XXPPXKKXXRXXXXRXXXPXXXPPXXPXPXXXSPXXPPPP 611
             PP              P   P   P P   +P  PPPP
Sbjct: 331 GIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPP 370


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 24/100 (24%), Positives = 29/100 (29%)
 Frame = +3

Query: 312 PXVQKTGAGXXPPTKXXLVXXKTPPGXXGXGGPPXFFKXXXGXXXPPQNRXXXXXXXXXX 491
           P   + G+G   P +  +V    PP     G PP       G   PP             
Sbjct: 277 PVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPG---PKPGFAPPPA---PPPPPPPMI 330

Query: 492 XXPPXKKXXRXXXXRXXXPXXXPPXXPXPXXXSPXXPPPP 611
             PP              P   P   P P   +P  PPPP
Sbjct: 331 GIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPP 370


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 24/100 (24%), Positives = 29/100 (29%)
 Frame = +3

Query: 312 PXVQKTGAGXXPPTKXXLVXXKTPPGXXGXGGPPXFFKXXXGXXXPPQNRXXXXXXXXXX 491
           P   + G+G   P +  +V    PP     G PP       G   PP             
Sbjct: 277 PVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPG---PKPGFAPPPA---PPPPPPPMI 330

Query: 492 XXPPXKKXXRXXXXRXXXPXXXPPXXPXPXXXSPXXPPPP 611
             PP              P   P   P P   +P  PPPP
Sbjct: 331 GIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPP 370


>BC096211-1|AAH96211.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 25/108 (23%), Positives = 30/108 (27%), Gaps = 1/108 (0%)
 Frame = +3

Query: 291 RXXKXXGPXVQKTGAGXXPPTKXXLVXXKTPPGXXGXGGPPXFFKXXXGXXXPPQNRXXX 470
           R  K  GP  Q       PP +      + P G     GPP   +       PPQ     
Sbjct: 158 RPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPP--RPGKPEGPPPQGGNQS 215

Query: 471 XXXXXXXXXPPXKKXXRXXXXRXXXPXXXPPXXPXPXXXS-PXXPPPP 611
                    P           +   P    P  P P   + P  PPPP
Sbjct: 216 QGPPPRPGKPEGSPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPP 263


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,720,845
Number of Sequences: 237096
Number of extensions: 1228347
Number of successful extensions: 5370
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4392
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)