Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_J03
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 57 6e-08
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 57 6e-08
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 57 6e-08
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 57 6e-08
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 57 6e-08
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 57 6e-08
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 57 6e-08
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 56 1e-07
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 56 1e-07
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 56 1e-07
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 56 1e-07
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 54 8e-07
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 47 7e-05
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 44 8e-04
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 44 8e-04
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 44 8e-04
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 44 8e-04
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 44 8e-04
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 44 8e-04
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 44 8e-04
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 44 8e-04
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 43 0.001
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 43 0.001
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 43 0.001
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 36 0.13
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 34 0.67
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 34 0.67
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 34 0.67
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 33 0.89
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 33 0.89
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 33 0.89
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 33 0.89
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 33 0.89
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 33 0.89
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 33 0.89
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 33 0.89
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 33 0.89
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 33 0.89
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 33 0.89
AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critic... 33 0.89
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 33 0.89
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 33 0.89
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 33 0.89
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 33 0.89
AK127166-1|BAC86864.1| 131|Homo sapiens protein ( Homo sapiens ... 33 1.2
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein. 32 2.1
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai... 32 2.1
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 32 2.1
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 32 2.1
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai... 32 2.1
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 32 2.1
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 32 2.1
AY049721-1|AAL06645.1| 2696|Homo sapiens androgen receptor assoc... 25 2.5
AF395588-1|AAL40694.1| 2696|Homo sapiens putative nuclear protei... 25 2.5
AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein. 25 2.5
AF380302-1|AAL27991.1| 2427|Homo sapiens androgen receptor-assoc... 25 2.5
AK055187-1|BAB70868.1| 1059|Homo sapiens protein ( Homo sapiens ... 25 2.7
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 32 2.7
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 32 2.7
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 32 2.7
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 32 2.7
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 32 2.7
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL353678-1|CAH71514.1| 395|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domai... 32 2.7
AL137849-1|CAI14918.1| 395|Homo sapiens zinc finger, CCHC domai... 32 2.7
AK023471-1|BAB14584.1| 395|Homo sapiens protein ( Homo sapiens ... 32 2.7
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 32 2.7
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 32 2.7
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein. 32 2.7
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 31 3.6
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 31 3.6
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 31 3.6
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 31 3.6
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 31 3.6
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 31 3.6
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 31 3.6
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 31 3.6
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 31 3.6
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 31 3.6
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 31 3.6
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 31 3.6
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 31 3.6
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 31 6.3
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 31 6.3
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 31 6.3
AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple ... 31 6.3
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 31 6.3
AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2... 31 6.3
AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1... 31 6.3
AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein. 31 6.3
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 31 6.3
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 31 6.3
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 30 8.3
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 30 8.3
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 30 8.3
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 30 8.3
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 30 8.3
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 114
Score = 52.8 bits (121), Expect = 1e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 98
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 94 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 136
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 137 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 93
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 117 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 152
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 81 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 105 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 144 GHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 126 GHIQKDCTKV----KCYRCGETGHVAINC 150
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 685 HFARDCKEEADRCCRCNGTGAHSARVRTEPGR 590
H A+DC + D C C G G H A+ EP R
Sbjct: 62 HLAKDCDLQEDACYNC-GRGGHIAKDCKEPKR 92
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG 456
C+ C +SGH +R CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 114
Score = 52.8 bits (121), Expect = 1e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 98
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 94 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 136
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 137 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 93
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 117 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 152
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 81 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 105 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 144 GHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 126 GHIQKDCTKV----KCYRCGETGHVAINC 150
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 685 HFARDCKEEADRCCRCNGTGAHSARVRTEPGR 590
H A+DC + D C C G G H A+ EP R
Sbjct: 62 HLAKDCDLQEDACYNC-GRGGHIAKDCKEPKR 92
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG 456
C+ C +SGH +R CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 114
Score = 52.8 bits (121), Expect = 1e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 98
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 94 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 136
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 137 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 93
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 117 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 152
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 81 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 105 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 144 GHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 126 GHIQKDCTKV----KCYRCGETGHVAINC 150
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 685 HFARDCKEEADRCCRCNGTGAHSARVRTEPGR 590
H A+DC + D C C G G H A+ EP R
Sbjct: 62 HLAKDCDLQEDACYNC-GRGGHIAKDCKEPKR 92
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG 456
C+ C +SGH +R CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 107
Score = 52.8 bits (121), Expect = 1e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 91
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 87 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 129
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 130 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 54 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 86
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 110 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 145
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 74 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 98 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 125
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 137 GHVAINCSKT-SEVNCYRCGESGHLAREC 164
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 119 GHIQKDCTKV----KCYRCGETGHVAINC 143
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 21/56 (37%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHVSRECD 402
C+ C +SGH +R CP G CY CG+ GH++++CD
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Frame = -3
Query: 781 HFXREC-TXGGWXXGIP--------VFNRQREKXFKXNXHRHFARDCKEEADRCCRCNGT 629
H+ REC T GG G+ V + + ++ H A+DC + D C C G
Sbjct: 14 HWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQEDACYNC-GR 72
Query: 628 GAHSARVRTEPGR 590
G H A+ EP R
Sbjct: 73 GGHIAKDCKEPKR 85
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 107
Score = 52.8 bits (121), Expect = 1e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 91
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 87 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 129
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 130 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 54 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 86
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 110 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 145
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 74 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 98 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 125
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 137 GHVAINCSKT-SEVNCYRCGESGHLAREC 164
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 119 GHIQKDCTKV----KCYRCGETGHVAINC 143
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 21/56 (37%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHVSRECD 402
C+ C +SGH +R CP G CY CG+ GH++++CD
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Frame = -3
Query: 781 HFXREC-TXGGWXXGIP--------VFNRQREKXFKXNXHRHFARDCKEEADRCCRCNGT 629
H+ REC T GG G+ V + + ++ H A+DC + D C C G
Sbjct: 14 HWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQEDACYNC-GR 72
Query: 628 GAHSARVRTEPGR 590
G H A+ EP R
Sbjct: 73 GGHIAKDCKEPKR 85
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 114
Score = 52.8 bits (121), Expect = 1e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 98
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 94 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 136
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 137 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 93
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 117 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 152
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 81 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 105 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 144 GHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 126 GHIQKDCTKV----KCYRCGETGHVAINC 150
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 685 HFARDCKEEADRCCRCNGTGAHSARVRTEPGR 590
H A+DC + D C C G G H A+ EP R
Sbjct: 62 HLAKDCDLQEDACYNC-GRGGHIAKDCKEPKR 92
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG 456
C+ C +SGH +R CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 57.2 bits (132), Expect = 6e-08
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = -2
Query: 521 LRPQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
L+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 59 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 104
Score = 53.6 bits (123), Expect = 8e-07
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -2
Query: 536 RGGGSLRPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
RGG + CY C +SGH++++C CY CG+ GH++++C E + + C
Sbjct: 34 RGGFTSDRDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCC 88
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 84 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 126
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 127 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 161
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 51 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKRE 83
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 107 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 142
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 71 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 101
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 95 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 122
Score = 38.7 bits (86), Expect = 0.024
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = -3
Query: 781 HFXREC-TXGGWXXGIPV-----FNRQREKXFKXNXHRHFARDCKEEADRCCRCNGTGAH 620
H+ REC T GG G+ F R+ ++ H A+DC + D C C G G H
Sbjct: 14 HWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDACYNC-GRGGH 72
Query: 619 SARVRTEPGR 590
A+ EP R
Sbjct: 73 IAKDCKEPKR 82
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 134 GHVAINCSKT-SEVNCYRCGESGHLAREC 161
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 18/53 (33%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG------------------TKTCYVCGKPGHVSRECD 402
C+ C +SGH +R CP G CY CG+ GH++++CD
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCD 58
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 116 GHIQKDCTKV----KCYRCGETGHVAINC 140
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 56.4 bits (130), Expect = 1e-07
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 67 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 109
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 89 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 131
Score = 51.6 bits (118), Expect = 3e-06
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCP--DGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C + + CY CG+ GH++++C E + + C
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCC 93
Score = 47.2 bits (107), Expect = 7e-05
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 54 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRE 88
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 132 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 112 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 147
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 76 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 100 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 127
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 139 GHVAINCSKT-SEVNCYRCGESGHLAREC 166
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 121 GHIQKDCTKV----KCYRCGETGHVAINC 145
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 21/56 (37%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHVSRECD 402
C+ C +SGH +R CP G CY CG+ GH++++CD
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 56.4 bits (130), Expect = 1e-07
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 108
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 88 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 130
Score = 50.8 bits (116), Expect = 5e-06
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCP-DGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C + CY CG+ GH++++C E + + C
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCC 92
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 131 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 165
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C DE +CYNC + GHIA++C E RE
Sbjct: 54 GHLAKDCDLQEDE-ACYNCGRGGHIAKDCKEPKRE 87
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 111 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 146
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 75 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 99 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 126
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 138 GHVAINCSKT-SEVNCYRCGESGHLAREC 165
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 120 GHIQKDCTKV----KCYRCGETGHVAINC 144
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 21/56 (37%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHVSRECD 402
C+ C +SGH +R CP G CY CG+ GH++++CD
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Frame = -3
Query: 781 HFXREC-TXGGWXXGIP--------VFNRQREKXFKXNXHRHFARDCKEEADRCCRCNGT 629
H+ REC T GG G+ V + + ++ H A+DC + D C G
Sbjct: 14 HWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGR 73
Query: 628 GAHSARVRTEPGR 590
G H A+ EP R
Sbjct: 74 GGHIAKDCKEPKR 86
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 56.4 bits (130), Expect = 1e-07
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 73 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 115
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 95 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 137
Score = 50.8 bits (116), Expect = 5e-06
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCP-DGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C + CY CG+ GH++++C E + + C
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCC 99
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 138 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C DE +CYNC + GHIA++C E RE
Sbjct: 61 GHLAKDCDLQEDE-ACYNCGRGGHIAKDCKEPKRE 94
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 118 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 153
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 82 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 106 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 133
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 145 GHVAINCSKT-SEVNCYRCGESGHLAREC 172
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 127 GHIQKDCTKV----KCYRCGETGHVAINC 151
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG 456
C+ C +SGH +R CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 56.4 bits (130), Expect = 1e-07
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEA 396
+ CYNC + GHI+++C + + CY CGKPGH++R+CD A
Sbjct: 73 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 115
Score = 52.0 bits (119), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHVSRECDEAR 393
R Q CYNC K GH++R+C + CY CG+ GH+ ++C + +
Sbjct: 95 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK 137
Score = 50.8 bits (116), Expect = 5e-06
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCP-DGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
P CY C +SGH++++C + CY CG+ GH++++C E + + C
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCC 99
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 138 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 523
GH+A++C DE +CYNC + GHIA++C E RE
Sbjct: 61 GHLAKDCDLQEDE-ACYNCGRGGHIAKDCKEPKRE 94
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 512 QTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
Q CY+C + GHI ++C TK CY CG+ GHV+ C +
Sbjct: 118 QKCYSCGEFGHIQKDC---TKVKCYRCGETGHVAINCSK 153
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDEPS--CYNCNKTGHIARNC 541
GHIA++C + E CYNC K GH+AR+C
Sbjct: 82 GHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+AR+C + DE CY+C + GHI ++C
Sbjct: 106 GHLARDCDHA-DEQKCYSCGEFGHIQKDC 133
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 145 GHVAINCSKT-SEVNCYRCGESGHLAREC 172
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 127 GHIQKDCTKV----KCYRCGETGHVAINC 151
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGG 529
C+ C ++GH AR CP GG
Sbjct: 6 CFKCGRSGHWARECPTGG 23
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDG 456
C+ C +SGH +R CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 53.6 bits (123), Expect = 8e-07
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT----CYVCGKPGHVSRECDEAR 393
CYNC +SGHI+++C D + CY CG+ GH++R+CD +
Sbjct: 67 CYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQK 108
Score = 48.8 bits (111), Expect = 2e-05
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCP-DGTKTCYVCGKPGHVSRECDEAR 393
R Q CY C + GH++R+C + CY CGK GH+ ++C + +
Sbjct: 87 RRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDCAQVK 129
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -2
Query: 548 GTVPRGGGSLRPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEAR 393
G + R + Q CY+C K GHI ++C CY CG+ GHV+ C +AR
Sbjct: 98 GHLARDCDRQKEQKCYSCGKLGHIQKDC--AQVKCYRCGEIGHVAINCSKAR 147
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 530 GGSLRPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPCLPYNQL 354
G + TCY C +SG ++NC CY CG+ GH++++C + + + C +L
Sbjct: 39 GSTTLSYTCYCCGESGRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRL 97
Score = 39.1 bits (87), Expect = 0.018
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNCPE 535
GH+AR+C + ++ CY+C K GHI ++C +
Sbjct: 98 GHLARDCDRQKEQ-KCYSCGKLGHIQKDCAQ 127
Score = 36.7 bits (81), Expect = 0.095
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 627 GHIARECAQSPDE--PSCYNCNKTGHIARNC 541
GHIA++C E CY C + GH+AR+C
Sbjct: 74 GHIAKDCKDPKRERRQHCYTCGRLGHLARDC 104
Score = 35.5 bits (78), Expect = 0.22
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++CAQ CY C + GH+A NC
Sbjct: 119 GHIQKDCAQV----KCYRCGEIGHVAINC 143
Score = 34.3 bits (75), Expect = 0.51
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRE 523
CYNC ++GHIA++C + RE
Sbjct: 67 CYNCGRSGHIAKDCKDPKRE 86
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 47.2 bits (107), Expect = 7e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT-CYVCGKPGHVSREC 405
CY C ++GH++ NC ++ CY CG+ GH++REC
Sbjct: 14 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 48
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GH+A C+++ E +CY C ++GH+AR C
Sbjct: 21 GHVAINCSKT-SEVNCYRCGESGHLAREC 48
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 627 GHIARECAQSPDEPSCYNCNKTGHIARNC 541
GHI ++C + CY C +TGH+A NC
Sbjct: 3 GHIQKDCTKV----KCYRCGETGHVAINC 27
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 485 GHISRNCPDGTKT-CYVCGKPGHVSRECDE 399
GHI ++C TK CY CG+ GHV+ C +
Sbjct: 3 GHIQKDC---TKVKCYRCGETGHVAINCSK 29
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT--CYVCGKPGHVSREC 405
C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 242 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 277
Score = 33.5 bits (73), Expect = 0.89
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 684 TLRGIARKRLTVAADVTARGHIARECAQSPDEPSCYNCNKTGHIARNCP 538
T R + + + + RGH+++ C C+ C++ GH+ +CP
Sbjct: 230 TQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 278
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTK-------TCYVCGKPGHVSRECDEARN 390
C+ C + GH+SR+CPD K C +CG H+ ++C E++N
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQN 231
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPD-------GTKTCYVCGKPGHVSREC 405
C++C K GH +CP GT CY CG H +C
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKC 170
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = -1
Query: 627 GHIARECAQSP-----DEPSCYNCNKTGHIARNCPE 535
GH++R C +P D C C H+ ++CPE
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTK-------TCYVCGKPGHVSRECDEARN 390
C+ C + GH+SR+CPD K C +CG H+ ++C E++N
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQN 231
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPD-------GTKTCYVCGKPGHVSREC 405
C++C K GH +CP GT CY CG H +C
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKC 170
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = -1
Query: 627 GHIARECAQSP-----DEPSCYNCNKTGHIARNCPE 535
GH++R C +P D C C H+ ++CPE
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT--CYVCGKPGHVSREC 405
C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.5 bits (73), Expect = 0.89
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 684 TLRGIARKRLTVAADVTARGHIARECAQSPDEPSCYNCNKTGHIARNCP 538
T R + + + + RGH+++ C C+ C++ GH+ +CP
Sbjct: 231 TQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 279
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT--CYVCGKPGHVSREC 405
C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.5 bits (73), Expect = 0.89
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 684 TLRGIARKRLTVAADVTARGHIARECAQSPDEPSCYNCNKTGHIARNCP 538
T R + + + + RGH+++ C C+ C++ GH+ +CP
Sbjct: 231 TQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 279
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT--CYVCGKPGHVSREC 405
C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.5 bits (73), Expect = 0.89
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 684 TLRGIARKRLTVAADVTARGHIARECAQSPDEPSCYNCNKTGHIARNCP 538
T R + + + + RGH+++ C C+ C++ GH+ +CP
Sbjct: 231 TQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 279
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT--CYVCGKPGHVSREC 405
C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 91 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 126
Score = 32.7 bits (71), Expect = 1.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 630 RGHIARECAQSPDEPSCYNCNKTGHIARNCP 538
RGH+++ C C+ C++ GH+ +CP
Sbjct: 97 RGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 127
Score = 31.5 bits (68), Expect = 3.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 582 CYNCNKTGHIARNCP 538
C NC+K GH+++NCP
Sbjct: 91 CRNCDKRGHLSKNCP 105
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNCPDGTKT--CYVCGKPGHVSREC 405
C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.5 bits (73), Expect = 0.89
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 684 TLRGIARKRLTVAADVTARGHIARECAQSPDEPSCYNCNKTGHIARNCP 538
T R + + + + RGH+++ C C+ C++ GH+ +CP
Sbjct: 231 TQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 279
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 527 GSLRPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEA 396
GS C+ C + GH+S C G C +CGK GH +C +A
Sbjct: 182 GSCTQDRCFRCGEEGHLSPYCRKGI-VCNLCGKRGHAFAQCPKA 224
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSREC 405
+P+TC+ C H+S +C C+ CG+ GH+S C
Sbjct: 167 QPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 202
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 527 GSLRPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEA 396
GS C+ C + GH+S C G C +CGK GH +C +A
Sbjct: 346 GSCTQDRCFRCGEEGHLSPYCRKGI-VCNLCGKRGHAFAQCPKA 388
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSREC 405
+P+TC+ C H+S +C C+ CG+ GH+S C
Sbjct: 331 QPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 366
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 527 GSLRPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSRECDEA 396
GS C+ C + GH+S C G C +CGK GH +C +A
Sbjct: 347 GSCTQDRCFRCGEEGHLSPYCRKGI-VCNLCGKRGHAFAQCPKA 389
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 518 RPQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHVSREC 405
+P+TC+ C H+S +C C+ CG+ GH+S C
Sbjct: 332 QPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 367
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Frame = -2
Query: 515 PQTCYNCNKSGHISRNCPDGTK------TCYVCGKPGHVSRECDEARN*P 384
P CY C K GH NCP G + C +C K + C E++ P
Sbjct: 434 PGNCYQCGKPGHWKANCPYGPRGEKPCTACPLCRKLRYWKENCPESQKGP 483
Score = 32.3 bits (70), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 609 CAQSPDEPSCYNCNKTGHIARNCPEGGR 526
C + +CY C K GH NCP G R
Sbjct: 428 CPKDTFPGNCYQCGKPGHWKANCPYGPR 455
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 33.9 bits (74), Expect = 0.67
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R + CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGRKCYNCGQIGHLKKNCP 560
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 33.9 bits (74), Expect = 0.67
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R + CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGRKCYNCGQIGHLKKNCP 560
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 33.9 bits (74), Expect = 0.67
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R + CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGRKCYNCGQIGHLKKNCP 560
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 129 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 173
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 137 HHAKECSLPPQPKKCHYCQSIMHMVANCP 165
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 314 CYNCGQIGHLKKNCPVLNKQNIT 336
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R CYNC + GH+ +NCP
Sbjct: 304 GGQVRTFGGKCYNCGQIGHLKKNCP 328
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 129 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 173
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 137 HHAKECSLPPQPKKCHYCQSIMHMVANCP 165
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 545 CYNCGQIGHLKKNCPVLNKQNIT 567
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R CYNC + GH+ +NCP
Sbjct: 535 GGQVRTFGGKCYNCGQIGHLKKNCP 559
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 106 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 150
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 114 HHAKECSLPPQPKKCHYCQSIMHMVANCP 142
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 106 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 150
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 114 HHAKECSLPPQPKKCHYCQSIMHMVANCP 142
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 106 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 150
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 114 HHAKECSLPPQPKKCHYCQSIMHMVANCP 142
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 106 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 150
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 114 HHAKECSLPPQPKKCHYCQSIMHMVANCP 142
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 106 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 150
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 114 HHAKECSLPPQPKKCHYCQSIMHMVANCP 142
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 129 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 173
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 137 HHAKECSLPPQPKKCHYCQSIMHMVANCP 165
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSRECDEARN*PQPP 375
CYNC H ++ C P K C+ C H+ C +N QPP
Sbjct: 129 CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPH-KNVAQPP 173
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCP 538
H A+EC+ P C+ C H+ NCP
Sbjct: 137 HHAKECSLPPQPKKCHYCQSIMHMVANCP 165
>AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critical
region candidate gene number 6 protein.
Length = 578
Score = 33.5 bits (73), Expect = 0.89
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 543 SSVRCGPSCCSCNTTARPGSVRTRALCAPVP 635
S C P CC C RPG R CAP P
Sbjct: 164 SGASCCPCCCCCGCPDRPGRRGRRRGCAPSP 194
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGGKCYNCGQIGHLKKNCP 560
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGGKCYNCGQIGHLKKNCP 560
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGGKCYNCGQIGHLKKNCP 560
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 33.5 bits (73), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 582 CYNCNKTGHIARNCPEGGRESAT 514
CYNC + GH+ +NCP +++ T
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNIT 568
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 530 GGSLRP--QTCYNCNKSGHISRNCP 462
GG +R CYNC + GH+ +NCP
Sbjct: 536 GGQVRTFGGKCYNCGQIGHLKKNCP 560
>AK127166-1|BAC86864.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ45231 fis, clone BRCAN2021452. ).
Length = 131
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 473 RNCPDGTKTCYVCGKPGHVSRECDEARN*PQPPC 372
+N D C CGKPG+V +C + P PC
Sbjct: 57 QNPKDAPVNCDKCGKPGNVKNDCPGSMRKPARPC 90
>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
Length = 1516
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 446 CYVCGKPGHVSRECDEAR 393
C++CG GHV REC E +
Sbjct: 1231 CFICGDAGHVRRECPEVK 1248
>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1645
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 446 CYVCGKPGHVSRECDEAR 393
C++CG GHV REC E +
Sbjct: 1360 CFICGDAGHVRRECPEVK 1377
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 597 PDEPSCYNCNKTGHIARNCPEGG 529
P +C+ C K GH +NCP G
Sbjct: 156 PPSYTCFRCGKPGHYIKNCPTNG 178
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 464 PDGTKTCYVCGKPGHVSREC 405
P + TC+ CGKPGH + C
Sbjct: 155 PPPSYTCFRCGKPGHYIKNC 174
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 509 TCYNCNKSGHISRNCP 462
TC+ C K GH +NCP
Sbjct: 160 TCFRCGKPGHYIKNCP 175
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 597 PDEPSCYNCNKTGHIARNCPEGG 529
P +C+ C K GH +NCP G
Sbjct: 23 PPSYTCFRCGKPGHYIKNCPTNG 45
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 464 PDGTKTCYVCGKPGHVSREC 405
P + TC+ CGKPGH + C
Sbjct: 22 PPPSYTCFRCGKPGHYIKNC 41
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 509 TCYNCNKSGHISRNCP 462
TC+ C K GH +NCP
Sbjct: 27 TCFRCGKPGHYIKNCP 42
>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1644
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 446 CYVCGKPGHVSRECDEAR 393
C++CG GHV REC E +
Sbjct: 1359 CFICGDAGHVRRECPEVK 1376
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 597 PDEPSCYNCNKTGHIARNCPEGG 529
P +C+ C K GH +NCP G
Sbjct: 156 PPSYTCFRCGKPGHYIKNCPTNG 178
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 464 PDGTKTCYVCGKPGHVSREC 405
P + TC+ CGKPGH + C
Sbjct: 155 PPPSYTCFRCGKPGHYIKNC 174
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 509 TCYNCNKSGHISRNCP 462
TC+ C K GH +NCP
Sbjct: 160 TCFRCGKPGHYIKNCP 175
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 32.3 bits (70), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 597 PDEPSCYNCNKTGHIARNCPEGG 529
P +C+ C K GH +NCP G
Sbjct: 156 PPSYTCFRCGKPGHYIKNCPTNG 178
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 464 PDGTKTCYVCGKPGHVSREC 405
P + TC+ CGKPGH + C
Sbjct: 155 PPPSYTCFRCGKPGHYIKNC 174
Score = 30.3 bits (65), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 509 TCYNCNKSGHISRNCP 462
TC+ C K GH +NCP
Sbjct: 160 TCFRCGKPGHYIKNCP 175
>AY049721-1|AAL06645.1| 2696|Homo sapiens androgen receptor associated
coregulator 267-b protein.
Length = 2696
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 479 ISRNCPDGTKTCYVCGKPGHVSREC 405
I C G TC+VC + G + C
Sbjct: 1582 ICNECRTGIHTCFVCKQSGEDVKRC 1606
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHI 477
GG +L+ C NC K G +
Sbjct: 1537 GGAALKENVCQNCEKLGEL 1555
>AF395588-1|AAL40694.1| 2696|Homo sapiens putative nuclear protein
NSD1 protein.
Length = 2696
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 479 ISRNCPDGTKTCYVCGKPGHVSREC 405
I C G TC+VC + G + C
Sbjct: 1582 ICNECRTGIHTCFVCKQSGEDVKRC 1606
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHI 477
GG +L+ C NC K G +
Sbjct: 1537 GGAALKENVCQNCEKLGEL 1555
>AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein.
Length = 2596
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 479 ISRNCPDGTKTCYVCGKPGHVSREC 405
I C G TC+VC + G + C
Sbjct: 1479 ICNECRTGIHTCFVCKQSGEDVKRC 1503
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHI 477
GG +L+ C NC K G +
Sbjct: 1434 GGAALKENVCQNCEKLGEL 1452
>AF380302-1|AAL27991.1| 2427|Homo sapiens androgen receptor-associated
coregulator 267-a protein.
Length = 2427
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 479 ISRNCPDGTKTCYVCGKPGHVSREC 405
I C G TC+VC + G + C
Sbjct: 1313 ICNECRTGIHTCFVCKQSGEDVKRC 1337
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHI 477
GG +L+ C NC K G +
Sbjct: 1268 GGAALKENVCQNCEKLGEL 1286
>AK055187-1|BAB70868.1| 1059|Homo sapiens protein ( Homo sapiens
cDNA FLJ30625 fis, clone CTONG2001820, highly similar to
Mus musculus NSD1 protein mRNA. ).
Length = 1059
Score = 25.4 bits (53), Expect(2) = 2.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 479 ISRNCPDGTKTCYVCGKPGHVSREC 405
I C G TC+VC + G + C
Sbjct: 545 ICNECRTGIHTCFVCKQSGEDVKRC 569
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHI 477
GG +L+ C NC K G +
Sbjct: 500 GGAALKENVCQNCEKLGEL 518
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 594 DEPSCYNCNKTGHIARNCPEGGRESATADL 505
D+ CY C K GH ++ CP R ADL
Sbjct: 158 DQSGCYRCGKEGHWSKECPI-DRSGRVADL 186
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 594 DEPSCYNCNKTGHIARNCPEGGRESATADL 505
D+ CY C K GH ++ CP R ADL
Sbjct: 158 DQSGCYRCGKEGHWSKECPI-DRSGRVADL 186
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 31.9 bits (69), Expect = 2.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATA 511
H A+EC P C+ C H+ +CP ++ +A
Sbjct: 147 HHAKECKLPPQPKKCHFCQSISHMVASCPLKAQQGPSA 184
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSREC 405
CYNC H ++ C P K C+ C H+ C
Sbjct: 139 CYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 594 DEPSCYNCNKTGHIARNCPEGGRESATADL 505
D+ CY C K GH ++ CP R ADL
Sbjct: 158 DQSGCYRCGKEGHWSKECPI-DRSGRVADL 186
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 31.9 bits (69), Expect = 2.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATA 511
H A+EC P C+ C H+ +CP ++ +A
Sbjct: 147 HHAKECKLPPQPKKCHFCQSISHMVASCPLKAQQGPSA 184
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSREC 405
CYNC H ++ C P K C+ C H+ C
Sbjct: 139 CYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 1451 KRCFICGREGHIKKECPQ 1468
>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 1215 KRCFICGREGHIKKECPQ 1232
>AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 740 KRCFICGREGHIKKECPQ 757
>AL353678-1|CAH71514.1| 395|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 351 KRCFICGREGHIKKECPQ 368
>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 1451 KRCFICGREGHIKKECPQ 1468
>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 1215 KRCFICGREGHIKKECPQ 1232
>AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 740 KRCFICGREGHIKKECPQ 757
>AL137849-1|CAI14918.1| 395|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 351 KRCFICGREGHIKKECPQ 368
>AK023471-1|BAB14584.1| 395|Homo sapiens protein ( Homo sapiens
cDNA FLJ13409 fis, clone PLACE1001716. ).
Length = 395
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 351 KRCFICGREGHIKKECPQ 368
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 31.9 bits (69), Expect = 2.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATA 511
H A+EC P C+ C H+ +CP ++ +A
Sbjct: 147 HHAKECKLPPQPKKCHFCQSISHMVASCPLKAQQGPSA 184
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSREC 405
CYNC H ++ C P K C+ C H+ C
Sbjct: 139 CYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 31.9 bits (69), Expect = 2.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 624 HIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATA 511
H A+EC P C+ C H+ +CP ++ +A
Sbjct: 147 HHAKECKLPPQPKKCHFCQSISHMVASCPLKAQQGPSA 184
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 506 CYNCNKSGHISRNC--PDGTKTCYVCGKPGHVSREC 405
CYNC H ++ C P K C+ C H+ C
Sbjct: 139 CYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
Length = 1090
Score = 31.9 bits (69), Expect = 2.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 452 KTCYVCGKPGHVSRECDE 399
K C++CG+ GH+ +EC +
Sbjct: 1046 KRCFICGREGHIKKECPQ 1063
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPEGGRES 520
SCYNC +GH A++C + E+
Sbjct: 853 SCYNCGVSGHYAQDCKQSSMEA 874
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPEGGRES 520
SCYNC +GH A++C + E+
Sbjct: 252 SCYNCGVSGHYAQDCKQSSMEA 273
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 669 ARKRLTVAADVTARGHIARECAQSPDEPS--CYNCNKTGHIARNC 541
+R R+ ++ + R R A+ P +P+ CY C + GH A +C
Sbjct: 75 SRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPEGGRES 520
SCYNC +GH A++C + E+
Sbjct: 809 SCYNCGVSGHYAQDCKQSSMEA 830
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPE 535
SCYNC TGH A++C +
Sbjct: 907 SCYNCGATGHRAQDCKQ 923
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 594 DEPSCYNCNKTGHIARNCP 538
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 594 DEPSCYNCNKTGHIARNCP 538
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
>AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple
domains 3 protein.
Length = 3501
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHISRNCP----DGTKTCYVCGKPGHVSRE 408
G SL Q+ C +GH S + P D T TC G PGH SR+
Sbjct: 2817 GKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQ 2862
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPE 535
SCYNC TGH A++C +
Sbjct: 790 SCYNCGATGHRAQDCKQ 806
>AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2
protein.
Length = 3667
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHISRNCP----DGTKTCYVCGKPGHVSRE 408
G SL Q+ C +GH S + P D T TC G PGH SR+
Sbjct: 2983 GKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQ 3028
>AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1
protein.
Length = 3707
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHISRNCP----DGTKTCYVCGKPGHVSRE 408
G SL Q+ C +GH S + P D T TC G PGH SR+
Sbjct: 3023 GKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQ 3068
>AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein.
Length = 2977
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -2
Query: 533 GGGSLRPQTCYNCNKSGHISRNCP----DGTKTCYVCGKPGHVSRE 408
G SL Q+ C +GH S + P D T TC G PGH SR+
Sbjct: 2293 GKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQ 2338
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPE 535
SCYNC TGH A++C +
Sbjct: 907 SCYNCGATGHRAQDCKQ 923
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 585 SCYNCNKTGHIARNCPE 535
SCYNC TGH A++C +
Sbjct: 868 SCYNCGATGHRAQDCKQ 884
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 536 RGGGSLRPQTCYNCNKSGHISRNCPDG 456
RG L TCY C + GH + C G
Sbjct: 235 RGPRPLEQVTCYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 536 RGGGSLRPQTCYNCNKSGHISRNCPDG 456
RG L TCY C + GH + C G
Sbjct: 235 RGPRPLEQVTCYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 536 RGGGSLRPQTCYNCNKSGHISRNCPDG 456
RG L TCY C + GH + C G
Sbjct: 235 RGPRPLEQVTCYKCGEKGHYANRCTKG 261
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 536 RGGGSLRPQTCYNCNKSGHISRNCPDG 456
RG L TCY C + GH + C G
Sbjct: 209 RGPRPLEQVTCYKCGEKGHYANRCTKG 235
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 536 RGGGSLRPQTCYNCNKSGHISRNCPDG 456
RG L TCY C + GH + C G
Sbjct: 210 RGPRPLEQVTCYKCGEKGHYANRCTKG 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,106,322
Number of Sequences: 237096
Number of extensions: 2087019
Number of successful extensions: 6892
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 5648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6773
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -