Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_I24
         (920 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118420-1|AAM48449.1|  250|Drosophila melanogaster RE74758p pro...    29   9.0  
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    29   9.0  
AE014296-1850|AAF50135.2|  250|Drosophila melanogaster CG12523-P...    29   9.0  

>AY118420-1|AAM48449.1|  250|Drosophila melanogaster RE74758p
           protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 388 GGGXKXXGGGGXPPPTXXFFFXEKXPGXGGXGG 486
           GGG    GGGG  PP        +    GG GG
Sbjct: 51  GGGSDHHGGGGGSPPVKVIKVIHETAPAGGSGG 83


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
            protein.
          Length = 1161

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +1

Query: 385  RGGGXKXXGGGGXPPPTXXFFFXEKXPGXGGXGGGAXAL 501
            RG G    GG G P P   F +     G G  G G  A+
Sbjct: 1080 RGTGGGGGGGRGDPSPLNSFVYHRVVDGIGVGGAGGPAI 1118


>AE014296-1850|AAF50135.2|  250|Drosophila melanogaster CG12523-PA
           protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 388 GGGXKXXGGGGXPPPTXXFFFXEKXPGXGGXGG 486
           GGG    GGGG  PP        +    GG GG
Sbjct: 51  GGGSDHHGGGGGSPPVKVIKVIHETAPAGGSGG 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,440,564
Number of Sequences: 53049
Number of extensions: 642987
Number of successful extensions: 2970
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1904
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)