Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_I17
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-4|CAC35836.2|  582|Caenorhabditis elegans Hypothetical ...    30   2.1  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   6.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   6.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   6.4  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    28   6.4  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    28   8.5  

>AL132904-4|CAC35836.2|  582|Caenorhabditis elegans Hypothetical
           protein Y111B2A.8 protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +1

Query: 517 KXPPPPPX-XXGGGGGPPXXXXXG 585
           K PPPPP     GGGGPP     G
Sbjct: 510 KPPPPPPQSQQAGGGGPPTRNASG 533


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 523 PPPPPXXXGGGGGPPXXXXXG 585
           PPPPP   G  GGPP     G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 523 PPPPPXXXGGGGGPPXXXXXG 585
           PPPPP   G  GGPP     G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 523 PPPPPXXXGGGGGPPXXXXXG 585
           PPPPP   G  GGPP     G
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPG 374


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 523 PPPPPXXXGGGGGPPXXXXXG 585
           PPPP     GGGGPP     G
Sbjct: 797 PPPPHFDRRGGGGPPFRPENG 817


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 523 PPPPPXXXGGGGGPP 567
           PPPPP   G GGG P
Sbjct: 32  PPPPPCGGGCGGGAP 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,300,392
Number of Sequences: 27780
Number of extensions: 190222
Number of successful extensions: 1331
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)