Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_I13
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    69   3e-11
L10333-1|AAA59950.1|  776|Homo sapiens nueroendocrine-specific p...    38   0.041
BC111694-1|AAI11695.1|  702|Homo sapiens RTN1 protein protein.         38   0.041
BC090862-1|AAH90862.1|  776|Homo sapiens reticulon 1 protein.          38   0.041
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   4.7  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   8.2  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   8.2  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +1

Query: 583 MIGRADIEGSKSNVAMNAWLPQASYPGGNFSGTSC 687
           MIGRADIEGSKS+VAMNAW PQASYP GNFS TSC
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSC 35


>L10333-1|AAA59950.1|  776|Homo sapiens nueroendocrine-specific
           protein A protein.
          Length = 776

 Score = 37.9 bits (84), Expect = 0.041
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 122 EPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRPVSRFECETRLVKSHCLE 283
           E +H+ + +P+L  +D   K K   I ++ P G+R P      E +++K H LE
Sbjct: 204 EVKHQEQHHPELEDKDLDFKNKDTDISIK-PEGVREPDKPAPVEGKIIKDHLLE 256


>BC111694-1|AAI11695.1|  702|Homo sapiens RTN1 protein protein.
          Length = 702

 Score = 37.9 bits (84), Expect = 0.041
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 122 EPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRPVSRFECETRLVKSHCLE 283
           E +H+ + +P+L  +D   K K   I ++ P G+R P      E +++K H LE
Sbjct: 130 EVKHQEQHHPELEDKDLDFKNKDTDISIK-PEGVREPDKPAPVEGKIIKDHLLE 182


>BC090862-1|AAH90862.1|  776|Homo sapiens reticulon 1 protein.
          Length = 776

 Score = 37.9 bits (84), Expect = 0.041
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 122 EPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRPVSRFECETRLVKSHCLE 283
           E +H+ + +P+L  +D   K K   I ++ P G+R P      E +++K H LE
Sbjct: 204 EVKHQEQHHPELEDKDLDFKNKDTDISIK-PEGVREPDKPAPVEGKIIKDHLLE 256


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 32  AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 166
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 359 TPLRPKPA*PNPARICSLWSPESRE 285
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 359 TPLRPKPA*PNPARICSLWSPESRE 285
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,342,700
Number of Sequences: 237096
Number of extensions: 2659250
Number of successful extensions: 6338
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6327
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)