Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_I04
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 227 7e-60
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 227 7e-60
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 227 7e-60
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 227 7e-60
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 227 7e-60
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 227 7e-60
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 227 7e-60
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 227 7e-60
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 2.9
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 2.9
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -3
Query: 747 IQLNGGTIEDKVKWXREHXENLSLSILCLPKMK*LTALVSPKXKGYKGVTSRWHTKKLPR 568
IQ+NGGTIE KV W REH E + + + + + G+KGVTSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 567 KTHQG 553
KTH+G
Sbjct: 243 KTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -3
Query: 747 IQLNGGTIEDKVKWXREHXENLSLSILCLPKMK*LTALVSPKXKGYKGVTSRWHTKKLPR 568
IQ+NGGTIE KV W REH E + + + + + G+KGVTSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 567 KTHQG 553
KTH+G
Sbjct: 243 KTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -3
Query: 747 IQLNGGTIEDKVKWXREHXENLSLSILCLPKMK*LTALVSPKXKGYKGVTSRWHTKKLPR 568
IQ+NGGTIE KV W REH E + + + + + G+KGVTSRWHTKKLPR
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 567 KTHQG 553
KTH+G
Sbjct: 145 KTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3
Query: 615 GYKGVTSRWHTKKLPRKTHQG 553
G+KGVTSRWHTKKLPRKTH+G
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -3
Query: 747 IQLNGGTIEDKVKWXREHXENLSLSILCLPKMK*LTALVSPKXKGYKGVTSRWHTKKLPR 568
IQ+NGGTIE KV W REH E + + + + + G+KGVTSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 567 KTHQG 553
KTH+G
Sbjct: 243 KTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -3
Query: 747 IQLNGGTIEDKVKWXREHXENLSLSILCLPKMK*LTALVSPKXKGYKGVTSRWHTKKLPR 568
IQ+NGGTIE KV W REH E + + + + + G+KGVTSRWHTKKLPR
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 567 KTHQG 553
KTH+G
Sbjct: 145 KTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3
Query: 615 GYKGVTSRWHTKKLPRKTHQG 553
G+KGVTSRWHTKKLPRKTH+G
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 227 bits (555), Expect = 7e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -1
Query: 581 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G + PKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -3
Query: 747 IQLNGGTIEDKVKWXREHXENLSLSILCLPKMK*LTALVSPKXKGYKGVTSRWHTKKLPR 568
IQ+NGGTIE KV W REH E + + + + + G+KGVTSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 567 KTHQG 553
KTH+G
Sbjct: 243 KTHKG 247
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = -1
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEP 273
N ++I + +KD ++K E+++ E + TP K +E
Sbjct: 864 NDAAWKIEKSKLEKDIALLKKQLPDEHEMKESTATPQNSISGESSPLRRQDSEKMLVLEL 923
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM-GTLKKDRIR 99
KK+I L K R+ ++LE+ ++ + + + DK F T K +++R
Sbjct: 924 KKQISILEK--RIADSNSSLEECKIQNAELRDQLAKVQANWEKDKEVFQHKTRKSEKLR 980
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = -1
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEP 273
N ++I + +KD ++K E+++ E + TP K +E
Sbjct: 864 NDAAWKIEKSKLEKDIALLKKQLPDEHEMKESTATPQNSISGESSPLRRQDSEKMLVLEL 923
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM-GTLKKDRIR 99
KK+I L K R+ ++LE+ ++ + + + DK F T K +++R
Sbjct: 924 KKQISILEK--RIADSNSSLEECKIQNAELRDQLAKVQANWEKDKEVFQHKTRKSEKLR 980
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = -1
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMEP 273
N ++I + +KD ++K E+++ E + TP K +E
Sbjct: 864 NDAAWKIEKSKLEKDIALLKKQLPDEHEMKESTATPQNSISGESSPLRRQDSEKMLVLEL 923
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM-GTLKKDRIR 99
KK+I L K R+ ++LE+ ++ + + + DK F T K +++R
Sbjct: 924 KKQISILEK--RIADSNSSLEECKIQNAELRDQLAKVQANWEKDKEVFQHKTRKSEKLR 980
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,773,049
Number of Sequences: 27780
Number of extensions: 409964
Number of successful extensions: 1031
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -