Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_I02
(775 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0302 - 2021221-2023305 33 0.19
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 32 0.58
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 32 0.58
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 1.0
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 1.3
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 30 2.3
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 29 3.1
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.1
07_03_1107 - 24024387-24024497,24025799-24026410 29 4.1
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.4
08_01_0018 - 141542-142108 29 5.4
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.4
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 28 7.2
08_02_0875 + 22103903-22106293 28 7.2
03_01_0131 - 1013982-1016246 28 7.2
02_04_0058 - 19329380-19330498,19330941-19330988,19331797-19332174 28 7.2
11_06_0610 - 25449085-25453284 28 9.5
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 28 9.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 9.5
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.5
>02_01_0302 - 2021221-2023305
Length = 694
Score = 33.5 bits (73), Expect = 0.19
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Frame = -1
Query: 724 SHPSPAISXTSTRSSNPRFHTPTTPDLTS--ISINPLTPY*KE-----FA--PGLKPPLS 572
SHPSP S T+ S +P TPT P S ++ P P + FA PG P+
Sbjct: 517 SHPSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIP 576
Query: 571 SEAPSAYLTPSSLGMAEGVSPP 506
S PS+ PS + G PP
Sbjct: 577 STPPSSGSPPSP---SSGYQPP 595
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 724 SHPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSA 554
S SP+ S TS + S ++PT+P TS +P +P +P P PS
Sbjct: 1760 SPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSH 1819
Query: 553 YLTPSSLGMAEGVSPPY 503
+PSS SP Y
Sbjct: 1820 AYSPSSPNYYSSTSPTY 1836
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.9 bits (69), Expect = 0.58
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Frame = -1
Query: 736 PYASSHPSPAISXTSTRSSNPRFHTPTTPDLT--SISINPLTPY*K------EFA----- 596
P +SS+PS T ++ P+ PTT L S + PL P + EFA
Sbjct: 270 PTSSSNPSTEFLYLGTLAAPPQQPPPTTSHLRPGSPELRPLPPLPRVGPPSGEFASRSSA 329
Query: 595 --PGLKPPLSSEAPSAYLTPSS 536
P PP ++EA S+ L+PSS
Sbjct: 330 SDPSTAPPAAAEASSSSLSPSS 351
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -1
Query: 724 SHPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSA 554
S SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1698 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSH 1757
Query: 553 YLTPSS--LGMAEGVSPPY 503
+PSS L SP Y
Sbjct: 1758 AYSPSSPRLSPYSQTSPNY 1776
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 709 AISXTSTRSSNPRFHTPTTP 650
A S T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -1
Query: 736 PYASSHPSPAISXTSTRSSNPRFHTPTTPDLTSISINPL---TPY*KEFAPGLKPPLSSE 566
P S +P A+ T T ++ ++ P P + P TP ++A +PP +S
Sbjct: 316 PQESYYPPSAVQPTDT--THQQYQAPPAPQSQAPPAPPQHYQTP--PQYAQYSQPPPASA 371
Query: 565 APSAYLTPSSLGMAEGVSPPY 503
PS + PS E V+ PY
Sbjct: 372 NPSTAVPPSVHQQPEEVAAPY 392
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 742 FRPYASSHPSPAISXTSTRSSNPRFHTPTTPDLTSI-SINPLTPY*KEFAPGLKPPLSSE 566
F P + +PA + + ++NP + P TP + ++ S NP T Y P L PPL E
Sbjct: 244 FAPVTNPTTTPATNPVTVPATNPAMN-PVTPGIVTVPSTNPATGYSNN--PNL-PPLYPE 299
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 96 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 197
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.1 bits (62), Expect = 4.1
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = -1
Query: 736 PYASSH--PSPAISXTST---RSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPL- 575
P ASS P+PA + T+T +S P PTTP + + P TP AP PP
Sbjct: 36 PPASSKKTPAPAAAPTTTTPPAASTPPAAAPTTPATPAPAEAPTTP-----APTKAPPTK 90
Query: 574 SSEAPSAYLTPSSLGMAEGVSPP 506
S++AP+ + SPP
Sbjct: 91 STKAPAPAPKAAKATPPPASSPP 113
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 88 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 234
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>08_01_0018 - 141542-142108
Length = 188
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 721 HPSPAISXTSTRSSNPRFHTPTT 653
HPSP+ + T+T + NP PTT
Sbjct: 161 HPSPSNATTTTNNHNPHHFHPTT 183
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -2
Query: 255 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 76
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 75 ILHSF 61
+LHSF
Sbjct: 1408 LLHSF 1412
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -1
Query: 736 PYASSHPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 569
P +S A++ T T +NP+ P P P P E+ L+PPL +
Sbjct: 506 PVSSFQRGRAVTMTPTPQNNPQRRPPPPPSPHVPVFKPEEPTYHEYELDLEPPLDA 561
>08_02_0875 + 22103903-22106293
Length = 796
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 721 HPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY 611
HP+P ++ S R NP+ PDL + +N L +
Sbjct: 505 HPAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAW 541
>03_01_0131 - 1013982-1016246
Length = 754
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 724 SHPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY-----*KEFAPGLKPPLSSEAP 560
S P+P+++ S+R N PD+T +N L + EFA G+ E+
Sbjct: 477 SSPAPSVAFFSSRGPNKASPGVLKPDITGPGMNILAAWAPGEMHTEFADGVSLSFFMESG 536
Query: 559 SAYLTPSSLGMA 524
++ TP G+A
Sbjct: 537 TSMSTPHLSGIA 548
>02_04_0058 - 19329380-19330498,19330941-19330988,19331797-19332174
Length = 514
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 499 ENKGAKPLQPCPVTRG*DTLMEPLMTTEAL 588
++ G +PLQP P D LM+P EAL
Sbjct: 30 DDGGGEPLQPAPFVSPLDQLMQPPRPLEAL 59
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 736 PYASSHPSPAISXTSTRSSNPRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKPPLSSE 566
P S P+P +S P HTP+ P+ T S +P TP K +P PP + E
Sbjct: 613 PAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 722 PPFPCDFGYINPIIKSPIPYTNHPRLN 642
PPFP + +NP++ Y + PR+N
Sbjct: 336 PPFPVEKVTVNPVVPPEKRYISPPRIN 362
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Frame = -1
Query: 742 FRPYASSHPSPAISXTSTRSSNPR--FHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 569
F P A+ PA +R + PR F T +TPD ++ P AP PP
Sbjct: 298 FPPVAAIAAPPAPPPARSRRTPPRTRFSTGSTPDTKQVTSPSPRPVQPSNAPPPPPPPPP 357
Query: 568 EAPSAYLTPSSLGMAEGVSPP 506
P P L A PP
Sbjct: 358 PPPPP--PPPKLNTAPKPPPP 376
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 456 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 367
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,781,789
Number of Sequences: 37544
Number of extensions: 465408
Number of successful extensions: 1491
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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