Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_H21
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 2.2
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 2.2
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 24 3.9
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 29 3.9
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 29 3.9
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 29 5.2
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 29 5.2
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 6.8
Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 385 PATTQTTILRVPPLLHDVTPTLRNPTANTCQARTSTHFT 501
P TT TT P + V+PT T ARTST T
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTSTTTT 516
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 385 PATTQTTILRVPPLLHDVTPTLRNPTANTCQARTSTHFT 501
P TT TT P + V+PT T ARTST T
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTSTTTT 516
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 298 QPRKSHLRLPVQTHKTFYHYANFLPQQILPATTQTTI 408
Q S L + V +TF L QQ+L TT+T++
Sbjct: 6 QEPHSLLEVVVALMETFSQSPQHLQQQLLSTTTRTSV 42
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 460 TANTCQARTSTHFTGKTCIRLRXPNTAASPDT 555
T C +T T TC+ L P T S T
Sbjct: 83 TCGYCTGTATTTRTSTTCVDLTNPTTGVSDCT 114
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 384 TSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLHPP 521
TSH ++ + +R T P+ ++ SS H L + N H P
Sbjct: 243 TSHQSSERLNSESRSSRSSQLTHNPSFDYSSSNHNTKLEQPNSHSP 288
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 384 TSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLHPP 521
TSH ++ + +R T P+ ++ SS H L + N H P
Sbjct: 243 TSHQSSERLNSESRSSRSSQLTHNPSFDYSSSNHNTKLEQPNSHSP 288
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 327 CADSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEE 455
C +D LC LLT L+ H N+ S++ C++ +
Sbjct: 142 CPTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVECFNKVNQ 184
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 327 CADSQDILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEE 455
C +D LC LLT L+ H N+ S++ C++ +
Sbjct: 142 CPTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVECFNKVNQ 184
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 300 TAEVSPPATCADSQDILPLCKLL 368
T V PPA C D D PL KL+
Sbjct: 84 TCNVCPPAICVDQWDNCPLYKLI 106
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 342 DILPLCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEPNREHLSSTHKHALHRKNLH 515
D LP N +SHH+N+N+ +T S T P+ + +T ++ +R++L+
Sbjct: 63 DQLPTSSHHPPLNSSSHHSNHNYPDTT-----LSSTSAPSTSNYLTTSTYSDNRRSLY 115
>Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical
protein ZK632.11 protein.
Length = 453
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 81 TEALKHTLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSSCWRRDL 221
+E +K T T ++ T +R L E+ G +IGSS WR+ L
Sbjct: 39 SETMKGTETEFEKFVIDRTITPQRKLNAEDVEKSGEDIGSSEWRKRL 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,670,505
Number of Sequences: 27780
Number of extensions: 358903
Number of successful extensions: 1044
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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