Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_H15
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 154 8e-38
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 154 8e-38
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 154 8e-38
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 154 8e-38
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 154 8e-38
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 154 8e-38
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 149 2e-36
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 149 2e-36
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 154 bits (373), Expect = 8e-38
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = -3
Query: 669 AQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVLV 490
AQDEMID IGVT+G + S H + P T + L K+ + G R
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------- 261
Query: 489 RKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFPH 334
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 262 --VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPR 319
Query: 333 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQTP 154
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 320 YGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTT 379
Query: 153 ADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 380 AEKRAFMGKLKRDFLAE 396
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/117 (45%), Positives = 65/117 (55%)
Frame = -2
Query: 787 KXRPKRAHIMEIQLTGVXWRTKXNGPREHXENLSLSILCCPR*ND*LHWGHPRAKDTKVS 608
+ R K+AH++EIQ+ G K + REH E + G R K
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 607 LFVGTQRSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -1
Query: 740 GPLEDKXKWAQRTXGEPIPVDSVLPKMK*LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
G +E K WA+ + + VD+V + + + +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 154 bits (373), Expect = 8e-38
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = -3
Query: 669 AQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVLV 490
AQDEMID IGVT+G + S H + P T + L K+ + G R
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------- 261
Query: 489 RKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFPH 334
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 262 --VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPR 319
Query: 333 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQTP 154
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 320 YGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTT 379
Query: 153 ADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 380 AEKRAFMGKLKRDFLAE 396
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/117 (45%), Positives = 65/117 (55%)
Frame = -2
Query: 787 KXRPKRAHIMEIQLTGVXWRTKXNGPREHXENLSLSILCCPR*ND*LHWGHPRAKDTKVS 608
+ R K+AH++EIQ+ G K + REH E + G R K
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 607 LFVGTQRSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -1
Query: 740 GPLEDKXKWAQRTXGEPIPVDSVLPKMK*LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
G +E K WA+ + + VD+V + + + +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 154 bits (373), Expect = 8e-38
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = -3
Query: 669 AQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVLV 490
AQDEMID IGVT+G + S H + P T + L K+ + G R
Sbjct: 114 AQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------- 163
Query: 489 RKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFPH 334
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 164 --VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPR 221
Query: 333 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQTP 154
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 222 YGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTT 281
Query: 153 ADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 282 AEKRAFMGKLKRDFLAE 298
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/117 (45%), Positives = 65/117 (55%)
Frame = -2
Query: 787 KXRPKRAHIMEIQLTGVXWRTKXNGPREHXENLSLSILCCPR*ND*LHWGHPRAKDTKVS 608
+ R K+AH++EIQ+ G K + REH E + G R K
Sbjct: 74 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 133
Query: 607 LFVGTQRSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 134 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -1
Query: 740 GPLEDKXKWAQRTXGEPIPVDSVLPKMK*LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
G +E K WA+ + + VD+V + + + +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 154 bits (373), Expect = 8e-38
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = -3
Query: 669 AQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVLV 490
AQDEMID IGVT+G + S H + P T + L K+ + G R
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------- 261
Query: 489 RKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFPH 334
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 262 --VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPR 319
Query: 333 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQTP 154
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 320 YGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTT 379
Query: 153 ADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 380 AEKRAFMGKLKRDFLAE 396
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/117 (45%), Positives = 65/117 (55%)
Frame = -2
Query: 787 KXRPKRAHIMEIQLTGVXWRTKXNGPREHXENLSLSILCCPR*ND*LHWGHPRAKDTKVS 608
+ R K+AH++EIQ+ G K + REH E + G R K
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 607 LFVGTQRSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -1
Query: 740 GPLEDKXKWAQRTXGEPIPVDSVLPKMK*LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
G +E K WA+ + + VD+V + + + +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 154 bits (373), Expect = 8e-38
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = -3
Query: 669 AQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVLV 490
AQDEMID IGVT+G + S H + P T + L K+ + G R
Sbjct: 114 AQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------- 163
Query: 489 RKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFPH 334
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 164 --VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPR 221
Query: 333 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQTP 154
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 222 YGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTT 281
Query: 153 ADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 282 AEKRAFMGKLKRDFLAE 298
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/117 (45%), Positives = 65/117 (55%)
Frame = -2
Query: 787 KXRPKRAHIMEIQLTGVXWRTKXNGPREHXENLSLSILCCPR*ND*LHWGHPRAKDTKVS 608
+ R K+AH++EIQ+ G K + REH E + G R K
Sbjct: 74 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 133
Query: 607 LFVGTQRSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 134 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -1
Query: 740 GPLEDKXKWAQRTXGEPIPVDSVLPKMK*LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
G +E K WA+ + + VD+V + + + +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 154 bits (373), Expect = 8e-38
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Frame = -3
Query: 669 AQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVLV 490
AQDEMID IGVT+G + S H + P T + L K+ + G R
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------- 261
Query: 489 RKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFPH 334
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 262 --VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPR 319
Query: 333 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQTP 154
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 320 YGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTT 379
Query: 153 ADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 380 AEKRAFMGKLKRDFLAE 396
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/117 (45%), Positives = 65/117 (55%)
Frame = -2
Query: 787 KXRPKRAHIMEIQLTGVXWRTKXNGPREHXENLSLSILCCPR*ND*LHWGHPRAKDTKVS 608
+ R K+AH++EIQ+ G K + REH E + G R K
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV 231
Query: 607 LFVGTQRSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -1
Query: 740 GPLEDKXKWAQRTXGEPIPVDSVLPKMK*LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
G +E K WA+ + + VD+V + + + +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 149 bits (361), Expect = 2e-36
Identities = 90/198 (45%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Frame = -3
Query: 672 VAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVL 493
+A +MID IGVT+G + S H + P T + L K+ + G R
Sbjct: 163 IAHTQMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------ 213
Query: 492 VRKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFP 337
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 214 ---VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFP 270
Query: 336 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQT 157
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 271 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQT 330
Query: 156 PADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 331 TAEKRAFMGKLKRDFLAE 348
Score = 85.0 bits (201), Expect = 6e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -2
Query: 589 RSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -1
Query: 653 LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
+ +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 169 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 149 bits (361), Expect = 2e-36
Identities = 90/198 (45%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Frame = -3
Query: 672 VAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRXLGKLPALELGILXGCRSL*LVL 493
+A +MID IGVT+G + S H + P T + L K+ + G R
Sbjct: 163 IAHTQMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACI--GAWHPSR------ 213
Query: 492 VRKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGFP 337
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGFP
Sbjct: 214 ---VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFP 270
Query: 336 HYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGRGRFQT 157
YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK G GRFQT
Sbjct: 271 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQT 330
Query: 156 PADKAAFMGTLKKDRIRE 103
A+K AFMG LK+D + E
Sbjct: 331 TAEKRAFMGKLKRDFLAE 348
Score = 85.0 bits (201), Expect = 6e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -2
Query: 589 RSYPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -1
Query: 653 LTALGSPKGKGYKGVTFRWHTKKLPRKTHQG 561
+ +G +G G+KGVT RWHTKKLPRKTH+G
Sbjct: 169 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 504
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,524,834
Number of Sequences: 27780
Number of extensions: 412074
Number of successful extensions: 970
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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