Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_H08
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70284-16|CAE17884.1|  155|Caenorhabditis elegans Hypothetical p...    29   3.7  
AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>Z70284-16|CAE17884.1|  155|Caenorhabditis elegans Hypothetical
           protein K07F5.16 protein.
          Length = 155

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 703 EDTARRGVDWAVHLSKNNAGVLRPAQRGQNXRVEQKGKS-WLDPD 572
           +DT +    WAV  S+ +    +P +  QN + E+  KS W D D
Sbjct: 96  QDTFQMSTHWAVPKSQPSIAANQPEKLSQNFKSEKSEKSRWSDGD 140


>AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical
           protein K10F12.4a protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 589 FCPFAPRXGSVLAELALGHLRYSLTDVPPSQLPAWQCPRT 708
           FCP+A R   VL  LA  ++   + +V P + P W  P++
Sbjct: 106 FCPYAQR---VLIYLAKKNIPVEVVNVNPDRSPNWYLPKS 142


>Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical
           protein F48F7.4 protein.
          Length = 925

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 660 DRCTAQSTPRLAVSSNRIRXEFKRXRXFPPRXHSXRLERT 779
           ++  +QST R++ +S   R E KR   F  R H  R++++
Sbjct: 469 EKSGSQSTTRMSKNSKGDRNEGKRELTFDERLHKARMQKS 508


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -2

Query: 253 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 74
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 73  SH--SKRETRRRSP 38
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,082
Number of Sequences: 27780
Number of extensions: 362961
Number of successful extensions: 867
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)