Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_H07
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          23   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   7.6  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 755 EFXPPNKTVXDXPRVYFRTTXSNALXSKQ 669
           E  PPN+T+     +   T  +NA+  K+
Sbjct: 82  ELLPPNRTINSVVYIEHLTKLNNAIEEKR 110


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 137 AESTTGSETRPTEKIRRETQ 196
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 328 LWATSTVYHSVYWVGYVISSGYDERVLMSC 417
           +W    V+ +V W+G+ I+SG +  V+ +C
Sbjct: 365 IWQEKIVFAAVTWLGW-INSGMNP-VIYAC 392


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 755 EFXPPNKTVXDXPRVYFRTTXSNALXSKQ 669
           E  PPN+T+     +   T  +NA+  K+
Sbjct: 203 ELLPPNRTINSVVYIEQLTKLNNAVEEKR 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,338
Number of Sequences: 438
Number of extensions: 3937
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)