Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_H05
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 33 0.27
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 32 0.61
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 32 0.61
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.1
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.9
AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical... 30 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 30 2.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.3
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 4.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.7
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 7.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 10.0
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 10.0
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 10.0
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 10.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 10.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 10.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 10.0
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
P P P P P PP PP P P PP P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -2
Query: 521 PXPXPXPLXPXXPPXXXX--PPXPHDRPXPPXXXP 423
P P P P+ P PP PP P P PP P
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMP 80
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 521 PXPXPXPLXPXXP--PXXXXPPXPHDRPXPPXXXPTXQGRRXRP 396
P P P P P P PP P P PP P+ RP
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRP 100
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXPTXQGR 408
P P P P P PP P DRP PP P R
Sbjct: 34 PLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRR 74
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 439 GXGRSWGXGGXXXXGGXXGWXGXGXGXGVXG 531
G G WG GG GW G G G G G
Sbjct: 228 GSGGGWGGGGGGRDRDRGGWGGGGGGRGYGG 258
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 533 RPXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
+P P P P P+ P P PP P P PP P
Sbjct: 222 KPSEP-PSPGPVDPSDEPSPSDPPGPPGPPGPPTRRP 257
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
P P PL P PP P P P PP P
Sbjct: 625 PVDPVTEASPLNPQPPPPPSPSPEPEPEPKPPVTPP 660
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 533 RPXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPP 435
RP P P P P P PP P P PP
Sbjct: 1101 RPPPPPPLPILQNPVATPMSQQPPLPSPAPPPP 1133
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 521 PXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
P P P P P PP PP P PP P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical
protein Y71F9AL.4 protein.
Length = 557
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 533 RPXTPXPXPXPLXPXXPPXXXXPPXPHDRP 444
R +P P P PL P PP PP +P
Sbjct: 506 RNPSPDPVPSPLTPPVPPSPMTPPDASTKP 535
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = -2
Query: 524 TPXPXPXPLXPXXPPXXXXPP----XPHDRPXPPXXXPTXQGRRXRPXXP 387
TP P P P P P PP P P PP P G P P
Sbjct: 271 TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -2
Query: 524 TPXPXPXP-LXPXXPPXXXXPPXPHDRPXPPXXXPTXQGRRXRPXXPR 384
TP P P + P PP PP P PP G P PR
Sbjct: 307 TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = -2
Query: 524 TPXPXPXPLXPXXPPXXXXPP----XPHDRPXPPXXXPTXQGRRXRPXXP 387
TP P P P P P PP P P PP P G P P
Sbjct: 281 TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -2
Query: 524 TPXPXPXP-LXPXXPPXXXXPPXPHDRPXPPXXXPTXQGRRXRPXXPR 384
TP P P + P PP PP P PP G P PR
Sbjct: 317 TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 515 PXPXPLXPXXPPXXXXPPXPHDRPXPP 435
P P PL P P PP P P PP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 521 PXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXPT 420
P P P P+ P PP P PH R P PT
Sbjct: 126 PPPRPPPVPPLSPP--ERPDIPHARVLPQRQKPT 157
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 521 PXPXPXPLXPXXPPXXXXPPXPHDRPXPP 435
P P P PP PP PH P PP
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
P P P P PP PP PH P PP P
Sbjct: 118 PQHAVPAPAPYQQQPPP---PPPPPHYPPPPPHYPP 150
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRP---XPPXXXPTXQGRRXRPXXP 387
P T P P P PP PP P P PP P G + P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRP---XPPXXXPTXQGRRXRPXXP 387
P T P P P PP PP P P PP P G + P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRP---XPPXXXPTXQGRRXRPXXP 387
P T P P P PP PP P P PP P G + P P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -1
Query: 504 PXPXXXXAXXXXAPPXPRPPXPPXXXPXXAGPXAAXXXP 388
P P + PP P PP P P P AA P
Sbjct: 29 PPPPKSASKMGPPPPAPAPPTAPEATPAAPAPDAAAAAP 67
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 524 TPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXPTXQ 414
TP P P PP PP P P P P Q
Sbjct: 688 TPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGPPGPQ 724
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 530 PXTPXPXPXPL-XPXXPPXXXXPPXPHDRPXPPXXXP 423
P T P P P P PP PP P PP P
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 530 PXTPXPXPXPL-XPXXPPXXXXPPXPHDRPXPPXXXP 423
P T P P P P PP PP P PP P
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 530 PXTPXPXPXPL-XPXXPPXXXXPPXPHDRPXPPXXXP 423
P T P P P P PP PP P PP P
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -1
Query: 504 PXPXXXXAXXXXAPPXPRPPXPPXXXPXXAGPXAAXXXP 388
P P + PP P PP P P P AA P
Sbjct: 29 PPPPKSASKMGPPPPAPAPPTAPEAAPAAPTPDAAAAAP 67
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -2
Query: 524 TPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXPTXQGRRXR-PXXP 387
+P P P P P PP PP PP P+ Q R R P P
Sbjct: 137 SPPPPPPPRVPRTPPPRSPPPR-----RPPMTPPSPQRRPPRTPPSP 178
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 445 GRSWGXGGXXXXGGXXGWXGXGXGXGVXG 531
GRS G G GG GW G G G G
Sbjct: 38 GRSGGWGRPGWGGGGPGWGRGGGGSGWGG 66
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -2
Query: 530 PXTPXPX-PXPLXPXXPPXXXXPPXPHDRPXPP 435
P TP P P P P PP PP P P
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSP 171
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -2
Query: 530 PXTPXPX-PXPLXPXXPPXXXXPPXPHDRPXPP 435
P TP P P P P PP PP P P
Sbjct: 139 PITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSP 171
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -2
Query: 530 PXTPXPX-PXPLXPXXPPXXXXPPXPHDRPXPP 435
P TP P P P P PP PP P P
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSP 171
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
P P P P P P PP P RP P P
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASP 109
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 530 PXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPPXXXP 423
P P P P P P PP P RP P P
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASP 331
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 533 RPXTPXPXPXPLXPXXPPXXXXPPXPHDRPXPP 435
R +P P P P P PP P P P PP
Sbjct: 1332 RSSSPSPPPPP-PPPPPPSDDLTPVPPPPPPPP 1363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,482,187
Number of Sequences: 27780
Number of extensions: 103458
Number of successful extensions: 1239
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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