Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_G22
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724           28   7.6  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           28   7.6  

>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
          Length = 574

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 755 GPPPXALXXQXRXXXRXXPRPXGXGAPXPXPXPGXXXXP 639
           GPPP +     R      P P G   P   P PG    P
Sbjct: 393 GPPPQSYPPNVRLPSPYVPPPSGPAPPFYGPNPGMYEPP 431


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/51 (35%), Positives = 18/51 (35%)
 Frame = -2

Query: 806 PKXXPPPXKXXXXXHGXGPPPXALXXQXRXXXRXXPRPXGXGAPXPXPXPG 654
           P   PP         G GPPP              PRP G G P P P PG
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPP-----PPPPAAPAAPRPPGPG-PGPPPPPG 375


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,578,503
Number of Sequences: 37544
Number of extensions: 214574
Number of successful extensions: 580
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)