Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_G09
         (846 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0506 - 18188785-18190599                                         35   0.094
08_02_1084 - 24232968-24234779                                         29   4.7  

>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 34.7 bits (76), Expect = 0.094
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 757 PRXXXRGGGLXXXXLGLWPXSGXGXWGG 840
           P    RGGG+    +G+WP    G WGG
Sbjct: 429 PAFFGRGGGMGAGGVGMWPDPSMGGWGG 456


>08_02_1084 - 24232968-24234779
          Length = 603

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 778 GGLXXXXLGLWPXSGXGXWGG 840
           GG+    +G+WP    G WGG
Sbjct: 426 GGMGAGGVGMWPDPNMGGWGG 446


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,827,238
Number of Sequences: 37544
Number of extensions: 208358
Number of successful extensions: 1332
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)