Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_F23
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 37 0.017
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 36 0.052
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 36 0.052
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 35 0.068
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 35 0.090
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.21
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 30 1.9
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 29 3.4
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 29 5.9
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 5.9
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 29 5.9
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 28 7.8
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMP 391
Q GF + T+++ L +L R+ + +DF KAFDTV H+A+ + L +G
Sbjct: 485 QAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGAD 544
Query: 390 EQFCGYIAHLYDTASTTLA-VNNEMSSPCKSGTR 292
+ + Y +T + ++ P G R
Sbjct: 545 GAYIDLLKECYKNCTTNFTPFHRPVAVPVTKGVR 578
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 308 VKVGRGVRQGDPLSPILFNVVMDLILASL 222
V V +GVRQGDP+SP LF+ ++ + L
Sbjct: 571 VPVTKGVRQGDPISPNLFSACLEHVFRKL 599
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 35.5 bits (78), Expect = 0.052
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMP 391
Q GF + T+++ L +L R+ + +DF KAFD+V H+A+ + L +G
Sbjct: 656 QAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGAD 715
Query: 390 EQFCGYIAHLYDTASTTLA-VNNEMSSPCKSGTR 292
+ + Y +T + ++ P G R
Sbjct: 716 GAYIDLLKECYKNCTTNFTPFHRPVAVPVTKGVR 749
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 308 VKVGRGVRQGDPLSPILFNVVMDLILASL 222
V V +GVRQGDP+SP LF+ ++ + L
Sbjct: 742 VPVTKGVRQGDPISPNLFSACLEHVFRKL 770
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 35.5 bits (78), Expect = 0.052
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 570 QRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMP 391
Q GF + T+++ L +L R+ + +DF KAFD+V H+A+ + L +G
Sbjct: 395 QAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGAD 454
Query: 390 EQFCGYIAHLYDTASTTLA-VNNEMSSPCKSGTR 292
+ + Y +T + ++ P G R
Sbjct: 455 GAYIDLLKECYKNCTTNFTPFHRPVAVPVTKGVR 488
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 308 VKVGRGVRQGDPLSPILFNVVMDLILASL 222
V V +GVRQGDP+SP LF+ ++ + L
Sbjct: 481 VPVTKGVRQGDPISPNLFSACLEHVFRKL 509
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 35.1 bits (77), Expect = 0.068
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 453 KAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMS---SPCKSGT-RGS 286
KAFD V+H L++ L G+ FC + + + ++ VNN + P SG +GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 285 SRGP 274
GP
Sbjct: 62 VSGP 65
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 308 VKVGRGVRQGDPLSPILFNVVMDLILASL 222
V V RGVRQGDP+SP LF+ ++ + L
Sbjct: 516 VPVTRGVRQGDPISPNLFSACLEHVFRQL 544
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 459 FAKAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTASTTLA-VNNEMSSPCKSGTRGSS 283
F KAFD+V E + + L+ +G+ + + Y STT + ++ P TRG
Sbjct: 467 FQKAFDSVEPEDVWDSLQQQGVQRGYINLLQECYTDCSTTFTPFHKNVTVPV---TRGVR 523
Query: 282 RGPSVADTL 256
+G ++ L
Sbjct: 524 QGDPISPNL 532
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 486 RECHVAVLDFAKAFDTVSHEALVELLRLRGMPEQFCGYIAHLYDTAST 343
R + +DF KAFD+V H+A+ + L +G E + + Y +T
Sbjct: 35 RSLTLVFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTT 82
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 308 VKVGRGVRQGDPLSPILFNVVMDLILASL 222
V V +GVRQGDP+SP LF+ ++ + L
Sbjct: 93 VPVTKGVRQGDPISPNLFSACLEHVFRKL 121
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -2
Query: 498 RKKLRECHVAVLDFAKAFDTVSHEALVELLR-LRGMPEQFCGYIAHLYDTASTTLAVNNE 322
R+ +C + ++D+ +++ E + LRG+P GY LY+T+ST+ V
Sbjct: 916 RQMALDCTIGLIDWLLEHSPDDVKSIQEAISILRGLPMNR-GYTKELYNTSSTSYRVTKT 974
Query: 321 MSSPCKSGTRGS 286
M +G R +
Sbjct: 975 MLCDKLAGNRSN 986
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3
Query: 293 GVRQGDPLSPILFNVVMDLILASLPERV 210
GV QG LSP+LF + ++ I + LPE+V
Sbjct: 76 GVPQGAVLSPLLFGIYVNDISSILPEKV 103
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 29.5 bits (63), Expect = 3.4
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = -2
Query: 468 VLDFAKAFDTVSHEALVELLRLRGMPE-QFCGYIAHLYDTASTTLAVN-NEMSSPCKSGT 295
V++ ++ V+ +A ELLR G PE A L+ N S C +G
Sbjct: 37 VMEESRTTREVADDAWEELLRKNGAPEASRAAVTAMLFGRNKRNAQCNCGAKSKGCPAGP 96
Query: 294 RGSSRGPSVADTLQRGDG-----PHPGFPA 220
G RGP+ A L DG HPG+ A
Sbjct: 97 PG-PRGPNGAPGLDGPDGLDGPDGHPGYAA 125
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 434 DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEF 535
D++ A+++ RSF L SPST+SS A F
Sbjct: 58 DSIKGAMSRGLVLKIVQRSFSLNSPSTSSSNASF 91
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 434 DTVSNALAKSSTAT*HSRSFFLLSPSTASSTAEF 535
D++ A+++ RSF L SPST+SS A F
Sbjct: 58 DSIKGAMSRGLVLKIVQRSFSLNSPSTSSSNASF 91
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +3
Query: 276 VPLTNPSSHFYRGCSFHCSRLR---WWTPYRIGEQCSRRTVRACPSTSAIRQV 425
VP + F RG H + WW YR GE PS+S +QV
Sbjct: 356 VPCKELAMKFQRGDILHVLNTKDDNWWQAYRDGEDIQHSLAGLIPSSSFRQQV 408
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 86 SAYRHSPQQRWTPASLPSTPQAGLGRQHRPER 181
SAY+ WTP+ PST AG R R
Sbjct: 34 SAYKSRKYSTWTPSPQPSTMNAGTQTDFRTAR 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,594,869
Number of Sequences: 27780
Number of extensions: 345644
Number of successful extensions: 1186
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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