Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_F19
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z82286-5|CAB05311.1|  130|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -1

Query: 437 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 258
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 257 SH--SKRETRRRSP 222
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


>Z82286-5|CAB05311.1|  130|Caenorhabditis elegans Hypothetical
           protein W02A2.8 protein.
          Length = 130

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -3

Query: 465 YCSVREEPQFRTFGSCTRPSGRW------CEATIRGIMPERL*GRSQPSRIRQGYAHCGA 304
           YC +R  P+ RT  SC  P  R+      CE  + G MPE     S+   +++G A   A
Sbjct: 56  YCHLRI-PKSRTSRSCPDPWRRYGAHVKLCE--VGGWMPENRNKNSKVIVVKKGSAPPAA 112

Query: 303 PRVGRLQTM 277
           PR   L T+
Sbjct: 113 PRCKPLMTV 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,342,540
Number of Sequences: 27780
Number of extensions: 386834
Number of successful extensions: 1139
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)