Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_E19
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   135   3e-32
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    30   2.2  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   6.6  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   8.8  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    28   8.8  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  135 bits (327), Expect = 3e-32
 Identities = 61/119 (51%), Positives = 79/119 (66%), Gaps = 5/119 (4%)
 Frame = -1

Query: 697 TPVYAYCGTFHTRCFINQIQAAFREPRXLIVLDPAQDHQPITEASYVNIPVIALCNTDSP 518
           T   A  G F   C  NQIQ  F+EPR L++ DP  DHQ +TEASYV +PVI+  NT+SP
Sbjct: 94  TGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESP 153

Query: 517 LRFVDIAIPCNTKSSHSIGLMWWLLAREVLRRRGVLPRDQRW-----DVVVDLFFYRDP 356
           L+ +DI +PCN K   SIGLMWW+LARE+L  RG + R   +     +++ DL+FYRDP
Sbjct: 154 LKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDP 212



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 764 PRXXFVI*SGPFGQRALXKFXAHTG 690
           P    V+ + P+ QRAL KF AHTG
Sbjct: 71  PADVVVVSARPYAQRALLKFAAHTG 95


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 214 CCTRCSSCFWSTPCSRGMVCP 152
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -1

Query: 223 RPACCTRCSSCFWSTPCSRGMVCPGTR*VEHNCRRTSRRHRSALV 89
           R  CCTRC +C     C  G  C G     H  + T+      L+
Sbjct: 105 RTCCCTRCCTCCRPCCCGCGCGCCGCGGGGHFLKSTAMARPKPLI 149


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 535 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 428
           CNTD+  R +     CNT   + +G+ + L+AR ++
Sbjct: 49  CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -3

Query: 563 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 456
           +C+HS    +      K CGHC PM   +HQ  P +  D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 484 TKSSHSIGLMWWLLA 440
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -1

Query: 175 CSRGMVCPGTR*VEHNCRRTSRRHRSALVGWIRSRLEC 62
           C  G++CPG    E  C +    H S    W +   EC
Sbjct: 424 CQNGLLCPGPATEERTCDKRPCPHWSNWGQWEKCSKEC 461


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -1

Query: 175 CSRGMVCPGTR*VEHNCRRTSRRHRSALVGWIRSRLEC 62
           C  G++CPG    E  C +    H S    W +   EC
Sbjct: 424 CQNGLLCPGPATEERTCDKRPCPHWSNWGQWEKCSKEC 461


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,118,386
Number of Sequences: 27780
Number of extensions: 319904
Number of successful extensions: 925
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)