Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_E12
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 148 8e-37
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 42 1e-04
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 28 1.3
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 28 1.8
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 27 2.3
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 27 2.3
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 27 2.3
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 27 3.1
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 26 5.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 5.4
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 26 7.1
SPBC18E5.03c |sim4||kinetochore protein Sim4 |Schizosaccharomyce... 26 7.1
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 9.4
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 148 bits (359), Expect = 8e-37
Identities = 70/177 (39%), Positives = 113/177 (63%)
Frame = -3
Query: 550 NDENVMSXAMYPQVASDFFRFRDKYGPVKHLDTKTFLVGPAVGDTIEVKIERGKTLDIRT 371
+D ++ + +P V ++ +F D+YG + + TK FL P + + + V+I++GKTL ++
Sbjct: 1007 SDCDIAAYTQFPGVFEEYRQFVDRYGDLTTVPTKFFLSRPEMNEEMHVEIDQGKTLIVKF 1066
Query: 370 VAVSEDMTAAGEREVFFELNGQLRSAFIRDENASKEMKIHPKAVKGDKNQVGAPMPGTVL 191
VA+ G+REV+FELNG+ R + D+ A+ E P+A G+ V APM GT++
Sbjct: 1067 VALGPLNPRTGQREVYFELNGENRHVTVEDKKAAIETVTRPRADPGNPGHVAAPMSGTIV 1126
Query: 190 TIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNGQKLEGDDLICTIE 20
I+VKEG KV+KG IAVLSAMKME+++ AP +G +K++++ G + G DL +E
Sbjct: 1127 EIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQGDSVNGGDLCAVLE 1183
Score = 50.8 bits (116), Expect = 2e-07
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = -2
Query: 782 NKLTAADINARAEELSFRSRWWSTCRSYR-IPYGGFPEPLRSKVXKXMPR-IEGRPGKEX 609
NKL+A D+ RA L F + + PYGGFPEPLR+ V K + + RPGK
Sbjct: 928 NKLSAEDVENRATTLDFPASVLDFFQGLMGQPYGGFPEPLRTNVLKGRRQPLTDRPGKFL 987
Query: 608 XSLNFDKLKGELKESF 561
+ +FD ++ L E F
Sbjct: 988 PAADFDAIRKLLSEKF 1003
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 41.9 bits (94), Expect = 1e-04
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = -3
Query: 316 LNGQLRSAFIRDENASKEMKIHPKAV----KGDKNQVGAPMPGTVLTIKVKEGDKVEKGQ 149
LNG + + RDE + I + + D Q+ P PG ++ V+ G+ ++ G+
Sbjct: 677 LNGHSYTVYYRDEVTGTRISIDNLSCMLEQENDPTQLRTPSPGKLVRFLVETGEHIKAGE 736
Query: 148 PIAVLSAMKMEMIVQAPKAGTVKTVSITNGQKLEGDDLI 32
A + MKM M + A + G V+ + G L+ D++
Sbjct: 737 AYAEVEVMKMIMPLVATEDGVVQLIK-QPGASLDAGDIL 774
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 375 LMSRVFPRSILTSMVSPTAGPTRKVLVSRCLTGPYLSRKRKKSL 506
L + V T + P PT+K ++R T P R R KSL
Sbjct: 52 LETNVSSHQSATKFIEPEPSPTKKTKLTRRDTRPLAERARPKSL 95
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 478 YGPVKHLDTKTFLVGPAVG 422
YGP KHLD K + G VG
Sbjct: 380 YGPAKHLDNKHTIFGRVVG 398
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +3
Query: 255 IFISLLAFSSLMKADRSCPLSSKKTSRSPAAVMSSDTATVLMSRVFPRSILTSMVSP 425
+FI+ S D+ P+ K +R P VM T + + P + V P
Sbjct: 506 VFINQKFLDSFAIVDKLLPVLEKVKTREPTVVMGMVTVYISAGAIIPEETVHEQVIP 562
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 625 RPSILGMXFXTFDLNGSGNPPYG 693
RPS M +F+LNGS NP +G
Sbjct: 671 RPSYGNMSRPSFELNGSRNPSHG 693
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 220 VGAPMPGTVLTIKVKEGDKVEKGQPIAVL--SAMKMEMIVQAPKAGTVKT 77
V AP G + VKEGD + Q IAV+ SA E PK VKT
Sbjct: 88 VTAPDAGVLKEQLVKEGDTITIDQDIAVIDTSAAPPEGGSAGPKKDEVKT 137
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +2
Query: 464 FDGPVLIAETEEVARDLXXXXXXXXXXXXXXWEKILSVHPLVYRSSEXXTLFRDVLRFSA 643
++ P+L++ T+ V L ++V+ LV + +E +F D +
Sbjct: 486 WNDPLLVSATDGVGSKLLIALSLNKHDTVGIDLVAMNVNDLVVQGAEPL-IFLDYFATGS 544
Query: 644 CXLXLSTSMVQGILHTVSDSSC 709
L +STS V+G++ + C
Sbjct: 545 LDLKVSTSFVEGVVKGCKQAGC 566
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 194 SHYQSEGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTRRRRFDLHYRIK 15
S+Y+ + R + +E D R + N+R S +Y DR +KR T + D H R K
Sbjct: 359 SNYRDDYRHRRKE--RDHRDDQSSFRNERFS--NYYGDDRSYHKRRNTGNKNCDDHLRDK 414
Query: 14 KKKK 3
++
Sbjct: 415 SPER 418
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -3
Query: 223 QVGAPMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVS 71
Q AP+ T TIK K P V SA + P A VS
Sbjct: 1039 QAAAPVTSTTTTIKQATTVSASKPAPSTVTSAASSPSNISKPSAPVANNVS 1089
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 754 PELRSFXSEVGGGVPAGAIGYRME 683
P+L + +GGG+P GA G R +
Sbjct: 263 PDLTTLGKYLGGGLPFGAFGGRAD 286
>SPBC18E5.03c |sim4||kinetochore protein Sim4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 632 EGRPGKEXXSLNFDKL-KGELKESF 561
+ RPGK SLNF+ + K +L E F
Sbjct: 198 KNRPGKNQPSLNFENISKKDLTEEF 222
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -3
Query: 319 ELNGQLRSAFIRDENASKEMKIHPKAVKGDKNQVGAPMPGTVL 191
E GQ + + D N + + VK D NQ + T+L
Sbjct: 796 ESKGQSKKTLLHDSNMESLKSVISRIVKKDSNQSDDSVESTIL 838
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,771,006
Number of Sequences: 5004
Number of extensions: 53080
Number of successful extensions: 177
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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