Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_E12
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1039 + 25610200-25610538,25611022-25611143,25611243-256113... 68 7e-12
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 38 0.007
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 35 0.064
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 34 0.11
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 32 0.45
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 30 2.4
05_03_0305 - 12005874-12006320 29 4.2
08_02_1154 - 24727668-24728275,24728503-24728844,24730216-24731119 29 5.6
07_01_0939 + 7939716-7940220,7940675-7941564 29 5.6
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 28 7.4
04_03_0732 + 19095320-19095827,19095848-19096621,19096863-190969... 28 7.4
03_02_0504 - 8976973-8979414 28 7.4
06_02_0037 - 10856616-10856915,10857527-10860238 28 9.7
04_04_1012 - 30104401-30104955,30105066-30106841 28 9.7
04_04_1005 - 30043698-30044252,30044363-30046138 28 9.7
03_05_1134 + 30624373-30624378,30624474-30624592,30624729-306248... 28 9.7
>12_02_1039 +
25610200-25610538,25611022-25611143,25611243-25611390,
25611681-25611818,25612106-25612165,25612234-25612392,
25612714-25612912,25613156-25613260,25613339-25613475,
25613812-25614037,25614119-25614282,25614408-25614524,
25614622-25614864,25614959-25615054,25615270-25615287
Length = 756
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = -3
Query: 277 NASKEMKIHPKAVKGDKNQVGAPMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAP 98
+AS E + HPK V APM G V+ + +K+G +VE+GQP+ V+ AMKME +V+AP
Sbjct: 672 SASSEARSHPKG------SVLAPMAGLVVKVLLKDGARVEEGQPVMVMEAMKMEHVVKAP 725
Query: 97 KAGTVKTVSITNGQKLEGDDLICTIE*KK 11
AG V+ + T GQ++ ++ T++ K
Sbjct: 726 CAGYVEGLKATAGQQVFDSSVLFTVKENK 754
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -3
Query: 202 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNG 59
GT+ T K GD+VE +PIA + K+ M V +P+AG ++ + G
Sbjct: 60 GTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASEG 107
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 35.1 bits (77), Expect = 0.064
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 202 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNG 59
GT+ K GD+VE +PIA + K+ + V +P+AG ++ + G
Sbjct: 88 GTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEG 135
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 202 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNGQ 56
G +++ EGD+V KG P+ V+ + K +M V+ G V V + G+
Sbjct: 56 GRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPAGE 104
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 202 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNGQ 56
G +++ EGD++ KG P+ V+ + K +M V+ G + V + G+
Sbjct: 64 GKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPAGE 112
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 206 ARNCSHYQSEGRRQSREGAADSRALRYENGNDRSSPQG 93
A N S +S ++R +ADSR RYENG+ G
Sbjct: 879 ASNGSVDRSSSHNETRSRSADSRGKRYENGDVNGGNSG 916
>05_03_0305 - 12005874-12006320
Length = 148
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -2
Query: 761 INARAEELSFRSRWWSTCRSYRIPYGGFPEPLRSKVXKXMPRIEGRPGKEXXSLNFDKLK 582
IN + E+ F+ R C RI YG P+ ++ +E P K + F +
Sbjct: 34 INGKEEKFEFQPRT-EQCSMVRIKYGPNPQNIQE--------VEVEPPKTDSLVRFMQNF 84
Query: 581 GELKESFPRHKRRERDVXGHVPA 513
E + + PR++ R V VPA
Sbjct: 85 QEKETTIPRNRYWRRPVKSPVPA 107
>08_02_1154 - 24727668-24728275,24728503-24728844,24730216-24731119
Length = 617
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 302 QLPVELEEDLALAGGRHV-LRHRHRPDVQGLSALYLNLDGVADRGADQ 442
++ + LE L+ G H R RP +SALY++++GVA + Q
Sbjct: 559 EVEMALENILSKKGPFHKGNRESSRPSKNQISALYMSIEGVATEASSQ 606
>07_01_0939 + 7939716-7940220,7940675-7941564
Length = 464
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 763 ISTPELRSFXSEVGGGVPAGAIG 695
+ TPELRS E+G +P AIG
Sbjct: 224 LETPELRSVRDELGATIPVFAIG 246
>07_03_0249 -
15816515-15816868,15817749-15817958,15818051-15818245,
15818318-15818393,15819982-15820021,15820155-15820283,
15820363-15820405
Length = 348
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 185 QSEGRRQS---REGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTRRR 42
++ GR +S R+ ++ R+ Y NG D + YR D + R++ R R
Sbjct: 287 RNRGRERSHDHRDRGSEYRSSSYRNGRDSERDRHRYRSDDMRKDRSRVRSR 337
>04_03_0732 +
19095320-19095827,19095848-19096621,19096863-19096906,
19097191-19097250
Length = 461
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 306 CP--LSSKKTSRSPAAVMSSDTATVLMSRVFP 395
CP L++ + SRSP +V +SD A +L+ VFP
Sbjct: 69 CPAGLTAGEFSRSPPSVAASDGAFLLLRVVFP 100
>03_02_0504 - 8976973-8979414
Length = 813
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 179 EGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTR 48
+GR +G R R +GND P+ W R DR D + + R
Sbjct: 352 DGRHDRDQGGRGGRGRRRGSGNDH--PRPWRRNDRDDDRDDRGR 393
>06_02_0037 - 10856616-10856915,10857527-10860238
Length = 1003
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 191 ENSSGHRGTHLILIAFHRLRVDLHF 265
+N GH G LIL+A H +R + F
Sbjct: 459 DNEGGHNGGDLILLATHAIRYKVFF 483
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 179 EGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTR 48
+GR +G R R +GND P+ W R DR D + + R
Sbjct: 352 DGRHARDQGGRGGRGRRRGSGNDH--PRPWRRNDRDDDRDDRGR 393
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 179 EGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTR 48
+GR +G R R +GND P+ W R DR D + + R
Sbjct: 352 DGRHARDQGGRGGRGRRRGSGNDH--PRPWRRNDRDDDRDDRGR 393
>03_05_1134 +
30624373-30624378,30624474-30624592,30624729-30624807,
30625784-30625858,30625954-30626028,30626314-30626651,
30626881-30627004,30627070-30627093
Length = 279
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 394 GKTLDIRTVAVSEDMTAAGEREV--FFELNGQLRSAFIR 284
G+ +RTV V AGEREV FF +G++ IR
Sbjct: 3 GERRAVRTVRVRNISDLAGEREVREFFSFSGEIEHVDIR 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,467,877
Number of Sequences: 37544
Number of extensions: 397216
Number of successful extensions: 1472
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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