Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_E08
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 34 0.11
11_03_0141 + 10646926-10647129,10648353-10648409,10648817-10649014 33 0.34
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 33 0.34
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 31 0.78
11_02_0027 - 7504076-7504904,7505024-7505219,7505401-7505467 31 1.0
11_01_0621 - 4981070-4981136,4982906-4983825 31 1.0
12_01_0447 - 3530766-3530942,3531058-3531147,3531396-3531478,353... 31 1.4
10_02_0042 + 4493692-4494019,4494428-4494441 31 1.4
06_01_0145 + 1092764-1093351 31 1.4
07_03_1160 - 24430240-24431268 30 1.8
05_04_0178 + 18775074-18775928 30 1.8
03_04_0101 - 17283293-17284009 30 1.8
02_02_0610 - 12113162-12113965 30 1.8
10_08_0223 - 15986763-15987575 30 2.4
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484... 30 2.4
04_04_0058 - 22416949-22418196 29 4.1
03_05_0067 - 20460206-20460703,20461255-20461530 29 4.1
03_02_0463 - 8673313-8673639,8674040-8674126,8674710-8674790,867... 29 4.1
08_02_1263 - 25695622-25695856,25696608-25696653,25696882-25697014 29 5.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.5
04_03_0904 + 20717005-20718087 29 5.5
04_01_0217 + 2748029-2748170,2748561-2748826 29 5.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.5
11_06_0563 - 25018219-25018658,25020381-25020459 28 7.2
09_04_0179 - 15366119-15366916 28 7.2
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 28 7.2
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 28 7.2
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 28 9.6
08_02_0220 + 14418092-14418538 28 9.6
04_04_1691 - 35393728-35394585 28 9.6
03_06_0471 + 34169562-34169892,34170121-34170347 28 9.6
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 28 9.6
01_06_0732 + 31561149-31561770,31561908-31561999 28 9.6
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 66 PEPP-WPLVLYPFGELPVRPF-WHPAGPPRSTPRPCLTGAE---AADGTGVLVMEA 218
P PP P +L PF +P R F W+P PP + P E A+G G + +A
Sbjct: 49 PSPPRLPPLLVPFAAVPARSFSWYPRSPPPAGPAAAEKAPEEDVRAEGEGAYLHDA 104
>11_03_0141 + 10646926-10647129,10648353-10648409,10648817-10649014
Length = 152
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 390 KLGGRLAALEARVTVSADV--RQPAVTGA-LATRSAPVRAPATRSGPGRDRTKRGGGA 226
+L GR A+ RV S D R+ A T A + RS+ A RS G KRGGGA
Sbjct: 5 ELAGRGGAMRCRVRQSVDDGRRRGATTAATVEKRSSAAAAGVKRSSDGSWAEKRGGGA 62
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 32.7 bits (71), Expect = 0.34
Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 7/120 (5%)
Frame = -1
Query: 564 PPPRAAQEXXXXXXXXXRETTAAARQQALAGPRM--LAPPEPKTFSLDEVINRTVQAVVE 391
PPP + + E TAA+ + A A P L P P T I A
Sbjct: 98 PPPPSIRTAAASSPTTPTEPTAASTEHATASPAQPPLTPVTPSTEPGAAAIEAAAAANSS 157
Query: 390 KLGGRLAALEARV---TVSADVRQP--AVTGALATRSAPVRAPATRSGPGRDRTKRGGGA 226
LA EA T S + R P A T A + P A + PG T GG A
Sbjct: 158 FADSSLAEPEAAATEPTASTEPRTPDAASTEHAAASTEPPTPNAASTEPGAATTDPGGAA 217
>04_04_1457 -
33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 135 AGPPRSTPRPCLTGAEAADGTGVLVMEASR 224
+GPPR T P +G E DG LV E++R
Sbjct: 320 SGPPRDTQTPTASGLEQEDGRKDLVSESAR 349
>11_02_0027 - 7504076-7504904,7505024-7505219,7505401-7505467
Length = 363
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 512 ERRPPPRGSKHSR-GHGCWLRQNRRP 438
ER PPP G K G+G W+ N RP
Sbjct: 13 EREPPPSGKKDCNYGNGKWVSDNNRP 38
>11_01_0621 - 4981070-4981136,4982906-4983825
Length = 328
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 27 LGGYRCSTLXGVQ--PEPPWPLVLYPFGELPVRPFWHPAGPPRSTPRPCLTGAE-AADGT 197
+ GYR L V+ PE + L L E P P HP PP TP P A A
Sbjct: 97 IAGYRREMLDLVRGLPESCYELSLRDIVESPPPPPPHPLPPPPPTPPPPTAEATITAAAA 156
Query: 198 GVLVMEASR 224
G + EAS+
Sbjct: 157 GAMGEEASK 165
>12_01_0447 -
3530766-3530942,3531058-3531147,3531396-3531478,
3531571-3531886,3531979-3532040,3532139-3532244,
3532346-3532412,3532495-3532608,3532706-3532784,
3533043-3533213,3534223-3534355,3534922-3535081,
3535179-3535330
Length = 569
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Frame = +2
Query: 221 ALAPPPRLVRSRP-------GPDLVAGARTGAERVAKAPVTAGCLTSAETVTLASRAASL 379
A APP R RSRP D A A G + + P + G LT TV + +L
Sbjct: 6 ATAPPSRRTRSRPPSASSRKSDDPSAAAANGNGKASSKPTSPGQLTGERTVRKLRLSKAL 65
Query: 380 P-PSFSTTAWTVRLMTSSRL 436
P +T + R M + R+
Sbjct: 66 TIPEGTTVSEACRRMAARRV 85
>10_02_0042 + 4493692-4494019,4494428-4494441
Length = 113
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/59 (35%), Positives = 23/59 (38%)
Frame = -3
Query: 451 RTEDLQPGRGHQPHRPGCSRKAGREASGSRGESDCFGRR*ATGSDGCFGHPLRSRTGSG 275
R L P RGH P P +G A GSR S GR+ G G P G G
Sbjct: 55 RRAPLSPPRGHPPLAPFAEIASGSSAFGSRAVSPPAGRQIRRGR----GTPAEGERGDG 109
>06_01_0145 + 1092764-1093351
Length = 195
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/62 (40%), Positives = 25/62 (40%)
Frame = -3
Query: 442 DLQPGRGHQPHRPGCSRKAGREASGSRGESDCFGRR*ATGSDGCFGHPLRSRTGSGHQVG 263
D QPG QP PG GR G RG GR A G G H R R G G G
Sbjct: 12 DDQPGEPGQPGEPGQPGGRGRGGRGGRG-----GRGGAGGRLG-VRHGRRGRRGGGGARG 65
Query: 262 PG 257
G
Sbjct: 66 QG 67
>07_03_1160 - 24430240-24431268
Length = 342
Score = 30.3 bits (65), Expect = 1.8
Identities = 32/112 (28%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Frame = +3
Query: 60 VQPEPPWPLVLYPFGELPVRPFWHPAGPPRSTPRPCLTGAEAADGTGVLVMEASR*RRP- 236
VQP P P P G P P P P+P + DG E SR +P
Sbjct: 102 VQPCPDQPPQPKPDGPPLPNPNQPPQPNPNGPPKPDMPPMPKPDGLPN-TYEPSRPDQPP 160
Query: 237 --LA*FDPVPGPTWWPEPVRERSGWPKHPSLPVA*RRPKQSLSPREPLASRP 386
++ P+P P P+P + P P P PK SP S P
Sbjct: 161 QPISDGPPLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPKPDGSPNSYAPSVP 212
>05_04_0178 + 18775074-18775928
Length = 284
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = -1
Query: 651 DDGAATSWXAGAXRSSRLPALTGDQWPVLPPPRAAQEXXXXXXXXXR---ETTAAARQQA 481
D AAT+ A ++ A D PV+ A+ E AAA +
Sbjct: 75 DGAAATAADAVVVAAAAAAAAAEDAMPVVVETDGAERKRRAREEEAGSMVELAAAAARAR 134
Query: 480 LAGPRMLAPPEPKTFSLDEVINRTVQAVVEKLGGRLAALEAR 355
AGPR AP P +L +R V+ V E+ GRLA R
Sbjct: 135 RAGPRGGAPLPPPLTTLARGGSR-VRMVQERRDGRLAVYAVR 175
>03_04_0101 - 17283293-17284009
Length = 238
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 245 VRSRPGPDLVAGARTGAERVAKAPVTAGCLTSAETVTLASRAASLPPSFSTTAWTVRLM 421
+ R GP L A A+ A + AP+ G + +A + L + +LPP + T RL+
Sbjct: 55 IAPRDGPALAAAAKLAARVFSDAPLLPGAIRAA--MGLVASVYALPPPHAGTLEDARLI 111
>02_02_0610 - 12113162-12113965
Length = 267
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = -1
Query: 492 RQQALAGPRMLAPPEPKTFSLDEVINRTVQAVVEKLGGRLAALEARVTVSAD-VRQPAVT 316
R QA GP + T + ++N + LG L+A S D V P
Sbjct: 127 RTQA-TGPAGVYTVNVTTTTGQSLVNVSTGVAAVPLGTTLSADFPLAVYSVDGVLLPEQM 185
Query: 315 GALATRSAPVRAPATRSGPGRDRTKRGGGANAK 217
A AP APA+ +G G ++ + GGA K
Sbjct: 186 FGKAKAPAPAAAPASAAGKGANKEHKKGGAMPK 218
>10_08_0223 - 15986763-15987575
Length = 270
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/83 (30%), Positives = 31/83 (37%)
Frame = -3
Query: 379 EASGSRGESDCFGRR*ATGSDGCFGHPLRSRTGSGHQVGPGTGSN*ARGRR*REASITST 200
E+ G G + +GR G G G GSG G G GS + G S S
Sbjct: 67 ESGGDSGNTWNYGRGGGAGGGGGGGGGTNGGYGSGSGSGYGMGSGSSGG----SGSSASA 122
Query: 199 PVPSAASAPVRHGRGVERGGPAG 131
PV ++ G G GG G
Sbjct: 123 PVALSSGGNYATGDGEGGGGGGG 145
>03_03_0168 -
15047383-15047847,15048085-15048192,15048313-15048464,
15048555-15048752,15049553-15050856,15051281-15051354,
15051458-15051492,15052853-15053015
Length = 832
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 441 TFSLDEVINRTVQAVVEKLGGRLAALEARVTVSADVRQPAVTGALATRSAPVRAPATRSG 262
T S+ EV TV V ++ + + +TVSA P V A+AT AP+ T G
Sbjct: 163 TVSITEVHKETVVQVTQEATPPITEVSQSLTVSAAEEPPKV-NAVATHEAPLSKAPTDKG 221
>04_04_0058 - 22416949-22418196
Length = 415
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 30 GGYRCSTLXGVQPEPPWPLVLYPFGELPVRPFWHPAGPPRSTPRPCLTGA 179
GGY CS+ + P PP ++L PF P+ P P +P P L GA
Sbjct: 17 GGYGCSSWP-LSPPPP-SVILTPFASPSPAPWACPPAFPAPSPSP-LHGA 63
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 63 QPEPPWPLVLYPFGELPVRPFWHPAGPPRSTPRPCLTGAEAAD 191
Q PP P Y G P W PP++ P P G A D
Sbjct: 22 QAGPPPPPPQYFQGAHPPAAMWGQPPPPQAAPPPAPAGGAAGD 64
>03_02_0463 -
8673313-8673639,8674040-8674126,8674710-8674790,
8674896-8675048,8675129-8675185,8675293-8675569,
8675634-8675749,8676372-8676523,8676627-8676816,
8676935-8677345
Length = 616
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = -1
Query: 360 ARVTVSADVRQPAVTGALATRSAPVRAPATRSGPGRDRTKRGGG 229
A T S +PA A A APVRA A + GR RT R GG
Sbjct: 7 ATFTPSRLAARPATPAAAA---APVRARAAVAAGGRRRTSRRGG 47
>08_02_1263 - 25695622-25695856,25696608-25696653,25696882-25697014
Length = 137
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 GVQPEPPWPLVLYPFGELPVRPFW---HPAGPPRSTPRPCLTGAEAADGTGVLVMEAS 221
G QP P +LY G LP P H GP P +TG D GV V++ S
Sbjct: 66 GAQPSDPVERILYRAGILPPPPMLAMAHKGGPRDRRPIDPMTG-RPLDLEGVTVVDDS 122
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 63 QPEPPWPLVLYPFGELPVRPFWHPAGPPRSTPRPCLTGAEAADG 194
+P PP P L P ++ + PF P GPP P P G G
Sbjct: 403 RPLPPPPPGLPP-AQMQMAPFGVPPGPPPMLPPPFYPGPPIQTG 445
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 252 PVPGPTWWPEPVRERSGWPKHPSLPVA*RRPKQSLSPREPLASRPAF 392
P P PT+ P+P + + P+ P +PK + +P P + P++
Sbjct: 152 PTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSY 198
>04_01_0217 + 2748029-2748170,2748561-2748826
Length = 135
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 125 KRPHWQLPKWVEHQWPWRFRLHPXQGRAPVAA 30
++P WQL K V W + HP QG P+AA
Sbjct: 80 QKPSWQLLKKVLMHLRWGYAKHPYQG-IPMAA 110
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 5.5
Identities = 33/99 (33%), Positives = 36/99 (36%), Gaps = 9/99 (9%)
Frame = +3
Query: 57 GVQPEPPWPLVLYPFGE-------LPVRPFWHPAGPPRSTPRPCLTGAEAADGTGVLVME 215
G P PP PL P G P P HPA P P P + A A G
Sbjct: 299 GHHPPPPHPL---PPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355
Query: 216 ASR*RRPLA*FDPVPGPTWWPEP--VRERSGWPKHPSLP 326
A+ P A P PGP P P G P P+LP
Sbjct: 356 AA----PAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALP 390
>11_06_0563 - 25018219-25018658,25020381-25020459
Length = 172
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 262 PGTGSN*ARGRR*REASITSTPVPSAASAPVRHGRGVERG 143
PG+GSN R R R+ +S P P+AA V G G + G
Sbjct: 109 PGSGSNGPRPTRIRQRRASSRPDPAAAGL-VPPGYGAKSG 147
>09_04_0179 - 15366119-15366916
Length = 265
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = -3
Query: 430 GRGHQPHRPGCSRKAGREASGSRGESDCFGRR*ATGSDGCFGHPLRSRTGSGHQVGPGTG 251
G GH + G G + +G +G GS +G+ S G GH G G+G
Sbjct: 204 GEGHG-YGQGSGYGEGHGSGHGQGSGSGYGEGYGKGSGNGYGNGSGSGYGEGHGYGSGSG 262
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 28.3 bits (60), Expect = 7.2
Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Frame = +3
Query: 51 LXGVQPEPPWPLVLYPFGELPVRPFWHPAGPP-----RS---TPRPCLTGAEAADGTGVL 206
L + P PP P G PV P++ P PP RS P P + + G G+L
Sbjct: 25 LSALSPPPPTTPESCPDGPSPVAPYFAPPPPPLCRRRRSWPPPPPPPRVSSSSYVGRGIL 84
Query: 207 VMEASR*RRPLA*FDPVPGPTWWPEPVRERSGWPKHPSLPVA*RRPKQSLSPREPLASRP 386
+ PL+ + P+ + P HPS P A P + P A+RP
Sbjct: 85 LPATFSIYSPLS-----TSSSASPDGSPDEDSSPPHPS-PAA-APPSSWVDRWLPQAARP 137
Query: 387 AFLL 398
+L
Sbjct: 138 YAML 141
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +3
Query: 582 HQSAPGDGSSXGL-----QRXRTSLL-HHRAVAELGAVLEVSNSPPSAVPPGHWXKQLM 740
H + GDG + L + + SL+ +H+A EL + S P + + HW KQL+
Sbjct: 116 HANDHGDGGTFALYSLISRHAKVSLIPNHQAEDELISGYSSSGKPSATLRRAHWLKQLL 174
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 258 PGPTWWPEPVRERSGWPKHPSLPVA*RRPKQSLSPREPLASRPAF 392
PG +P+ R P P P+ RRP P +PL RP F
Sbjct: 425 PGLARPRKPLGRRPPGPARPGKPLG-RRPPGPARPGKPLGRRPDF 468
>08_02_0220 + 14418092-14418538
Length = 148
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 467 GCWLRQNRRPSAWTRSSTAPSRL**KSWAGG*RLSRRE*LFRP 339
G W R R SAW R SR+ GG RR L RP
Sbjct: 28 GGWGRPRLRFSAWRRKKATTSRVAVHCGGGGGGWGRRRLLLRP 70
>04_04_1691 - 35393728-35394585
Length = 285
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -1
Query: 606 SRLPALTGDQWPVLPPPRAAQEXXXXXXXXXRETTAAARQQALAGPRMLAPPEP 445
S++ L+ D P++ P A TTA A A R LAPP P
Sbjct: 223 SKMMILSNDNIPLVVSPTAVHTQGTGGDIINDATTAPAAAAAADHRRHLAPPPP 276
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/68 (25%), Positives = 24/68 (35%)
Frame = -3
Query: 433 PGRGHQPHRPGCSRKAGREASGSRGESDCFGRR*ATGSDGCFGHPLRSRTGSGHQVGPGT 254
PG GH P G G +G+ G A + H +R G GH +
Sbjct: 101 PGHGHGPPMQGGGMLGGGHGAGASGYGALLAGGAAVAAAAVGAHMVRPGGGGGHGMFGHH 160
Query: 253 GSN*ARGR 230
G +G+
Sbjct: 161 GGKFKKGK 168
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 174 GAEAADGTGVLV-MEASR*RRPLA*FDPVPGPTWWPEPVRERSGWPKHPSLP 326
GA A GTG ++ + R RRP P+PG P P + PK LP
Sbjct: 200 GAAAIVGTGYIIYLLVKRRRRPRDARPPLPGNGGQPPPGGDHPQAPKLKHLP 251
>01_06_0732 + 31561149-31561770,31561908-31561999
Length = 237
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 275 AGARTGAERVAKAPV--TAGCLTSAETVTLA-SRAASLPPS 388
AGA GA+R+A AP AG L V+L+ +RAA+ PS
Sbjct: 9 AGAGVGADRLAAAPALQAAGALPPRVDVSLSLARAANGQPS 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,953,630
Number of Sequences: 37544
Number of extensions: 483800
Number of successful extensions: 2434
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2419
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -