Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_D21
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 31 0.81
01_06_0945 + 33217310-33217427,33218820-33219433 31 1.1
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 31 1.4
02_02_0063 + 6481568-6481570,6481922-6482470 31 1.4
12_02_1022 - 25371291-25371910,25373593-25374046 30 2.5
11_07_0002 - 27171791-27172222 29 3.3
09_02_0279 + 6702517-6702948 29 3.3
09_02_0015 - 2980811-2980924,2981231-2981266,2981447-2981519,298... 29 3.3
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 3.3
05_06_0281 + 26912419-26913099 29 3.3
03_04_0123 + 17475020-17475243,17475367-17475445,17476295-174763... 29 3.3
11_06_0610 - 25449085-25453284 29 4.3
11_01_0763 + 6402901-6403971,6404581-6404826 29 4.3
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.3
02_03_0303 - 17506392-17506399,17507055-17507286,17507390-175074... 28 7.6
02_01_0289 - 1937125-1937385,1937570-1937611 28 7.6
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 28 10.0
08_01_1025 + 10361064-10361237,10361807-10361877,10362001-103622... 28 10.0
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 28 10.0
04_04_1651 - 35057525-35057680,35058302-35058311,35058429-350585... 28 10.0
03_06_0199 + 32310272-32311432 28 10.0
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 28 10.0
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 28 10.0
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 28 10.0
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 31.5 bits (68), Expect = 0.81
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Frame = +1
Query: 142 LNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVS 321
+ND A H D + G+ PD QP A P+D QP PS + TS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSS--SPATTSPAH 233
Query: 322 VRQLVGPPRRCRWCPGIPRW-TRTSLPGRDAIHRRPVALF 438
R+ G P P W + LP R R P+ F
Sbjct: 234 PRRAHGQVLLGSH-PRGPHWRVQGHLPQRQGPRRVPIDFF 272
>01_06_0945 + 33217310-33217427,33218820-33219433
Length = 243
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +1
Query: 130 RAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQP---TEPSRRIEG 300
R P + S A P RG+ P P S L+P A H A P T P RR G
Sbjct: 45 RPSPSSPSGARSSSPGTPPRGRRP------PPSNLRPAAAQHRSPASPRLPTLPGRRGHG 98
Query: 301 SETSAVSVRQLVGP 342
++ L+GP
Sbjct: 99 GGAASAGELALLGP 112
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 316 VSVRQLVGPPRRCRWCPGIPRWTR 387
+ + ++V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 440 VNRATGRRCIASRPGRLVLVQRGIPGHQRHRLGGP 336
V ATGRR A+RPGRLV + + G +R GP
Sbjct: 127 VTVATGRRDAATRPGRLVAMAATV-GSRREERRGP 160
>12_02_1022 - 25371291-25371910,25373593-25374046
Length = 357
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/57 (36%), Positives = 24/57 (42%)
Frame = -1
Query: 688 RPGRRCSTXASPPYPEEGXGAREGELFPFRTDPSPSSRGPRREYARTSRPL*VAASP 518
R R C S P EEG G+ G + P P S PRR TS + AA P
Sbjct: 100 RSPRSCHQQTSQPAIEEGDGSY-GRMLQLSA-PHPPSLSPRRRQRWTSTCVDAAAQP 154
>11_07_0002 - 27171791-27172222
Length = 143
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 426 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRP 337
RS+ + +AGS PAG G+PA G P
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSP 84
>09_02_0279 + 6702517-6702948
Length = 143
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 426 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRP 337
RS+ + +AGS PAG G+PA G P
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSP 84
>09_02_0015 -
2980811-2980924,2981231-2981266,2981447-2981519,
2981608-2981882,2982286-2982504,2983537-2983828,
2983863-2984221,2984634-2984714,2984746-2984889,
2985235-2985538,2985617-2985849
Length = 709
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = -3
Query: 446 RGVNRATGRRCIASRPGRLVLVQRGIPGHQRHRL-----GGPTSCRTETADVSEPSIRL 285
R +N+ R C + R + Q+GI G++++R G P + T D+ P++RL
Sbjct: 449 RELNQKEVRSCTSDFKRRDLCQQKGIFGYEKNRFWEDISGAPICKKPRTNDIHNPTLRL 507
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 132 GPPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
GPP D + P EP + +A T RR GSP PA A +A
Sbjct: 122 GPPPPPPPPPSPKDAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>05_06_0281 + 26912419-26913099
Length = 226
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 235 QPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQLVGPPRRCRWCPGIPRWTRTSLPGRD 408
+P G P + P P+ ++ +R+ GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>03_04_0123 +
17475020-17475243,17475367-17475445,17476295-17476393,
17476499-17476682,17477139-17477206,17477530-17477787,
17477996-17478049,17478149-17478355,17478507-17478633,
17479409-17479575
Length = 488
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/81 (27%), Positives = 30/81 (37%)
Frame = +1
Query: 157 ALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQLV 336
A L PT D + E GL R+ + +PK+ P+ VS QL+
Sbjct: 166 ANLGPTLDKAQAAKIQEQEGLLRAAVNYGEGVYPKNTSTFVPNVVNAQGNPMQVSGGQLL 225
Query: 337 GPPRRCRWCPGIPRWTRTSLP 399
G P G P + S P
Sbjct: 226 GRPAPSPGATGTPNFENVSTP 246
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 172 TSDPLRGQNPDEVGGLPRSTLQ-PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQLVGPPR 348
T P + P+E P S + P AHP P+E S E+S + + PP
Sbjct: 767 TPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPS 826
Query: 349 RCRWCPGIPRWTRTSLPGRDA 411
P P ++S P +A
Sbjct: 827 GHEGTPPSP--VKSSSPPPEA 845
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +3
Query: 201 G*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQ 347
G GRGA R RG G DGA + RRL AA R A+
Sbjct: 54 GGGRGAATHQGRRRWRGVGSGGGGDGAATSRRRLARQPAAAVAAARCAR 102
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 173 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 262
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>02_03_0303 -
17506392-17506399,17507055-17507286,17507390-17507461,
17507561-17508586,17509194-17509448,17510483-17510962
Length = 690
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = -1
Query: 682 GRRCSTXASPPYPEEGXGAREGELFP--FRTDPSPSSRGPR--REYARTSRPL*VAASPP 515
G R + ++PP P R+G L + PSP PR R +TS L + PP
Sbjct: 98 GSRGESSSAPPPPPRSRVLRQGGLEEEYAKNSPSPLGFAPRLIRHDRQTSYELASTSRPP 157
Query: 514 VKVKGRP 494
G P
Sbjct: 158 APEMGEP 164
>02_01_0289 - 1937125-1937385,1937570-1937611
Length = 100
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 138 PTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPA 272
PT LC + PD SP R P G G + RR G G A
Sbjct: 36 PTSGSLCAMLPDSCSPHR--PQLGVGCRQIGVRRRRTGGMNGSGA 78
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 27.9 bits (59), Expect = 10.0
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +1
Query: 115 GPKDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPR-STLQPDGAAHPKDAQPTEPSRR 291
GP+D + + A + +P GG+ R S+ +P+GAA + +R
Sbjct: 252 GPRDGGSGGSRPADARGKRKQEGFSSPSPPRGGGVARVSSRRPEGAAPTPQPEGERKKKR 311
Query: 292 IEGSETSAVSVRQLVGPPRRCRWCPGIPRWTRTSLPGR 405
+ + S L+ PP RW R R+ +P R
Sbjct: 312 LRKMGGTEPSRGNLISPP---RW--SFNRPPRSEIPSR 344
>08_01_1025 +
10361064-10361237,10361807-10361877,10362001-10362235,
10362317-10362520
Length = 227
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +1
Query: 130 RAHPLNDSSALLHPTSDP---LRG-QNPDEVGGLPRSTLQPDGAAHPKDAQ 270
RA P+ D + P+S+ L G Q P VG + R ++ D AA P DA+
Sbjct: 147 RASPVIDLNEACEPSSEEMEELHGYQEPVRVGRVMRYPMEGDFAAGPSDAK 197
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 694 STRPGRRCSTXASP-PYPEEGXGAREGELFPFRTDPSPSSRGPRREYARTSRP 539
ST PG + A P PYP G P PSP+ PRR + R P
Sbjct: 61 STTPGHQTPGVAWPSPYPSGGASP-----LPAGVSPSPARSTPRRFFKRPFPP 108
>04_04_1651 -
35057525-35057680,35058302-35058311,35058429-35058569,
35058675-35058784,35058907-35059006,35059108-35059308,
35059674-35059879,35060504-35060716,35060785-35060923,
35061370-35061606,35061688-35061893,35062664-35062759,
35062900-35063040
Length = 651
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 199 PDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQLVGP 342
PD + STL+P +HP+ + S + SE + S L+ P
Sbjct: 153 PDRLFDCLPSTLRPSSESHPEGGKNQSHSENQQNSEAAVYSPPALIEP 200
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 80 SHIPRAPLLRGDLVGGSALYPKKKKK 3
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 432 SDRSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDELPYRDGR 310
S + R +AGSG S +P P+ RP L GR
Sbjct: 10 SPEQPLLRPSAARAGSGSGNLSSSPPPPAARPSRLAALIGR 50
>01_06_1507 - 37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 393 AGSGPAGYSGTPAAPSGRPDE 331
AGSGP G PA P+ RP +
Sbjct: 1031 AGSGPYGGGAPPARPNSRPQQ 1051
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -3
Query: 308 VSEPSIRLEGSVGWASLG*AAPSGCSVDRGSPPTSSGF*PRRGSDVGCKSAEESFSGWAL 129
VS S EGS + S+ GSP +S+G G+ G ++ F G L
Sbjct: 269 VSRTSSCREGSGRFQEQRSVVTRTSSIREGSPESSNGASSSTGASTGTNTSTSRFGGLRL 328
Query: 128 KSLG 117
LG
Sbjct: 329 PGLG 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,993,001
Number of Sequences: 37544
Number of extensions: 512448
Number of successful extensions: 1842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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