Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_D21
         (805 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   3.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   7.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 485 HPLRSPLDLHRGGGRHLQGPGRTG 556
           HP +  L +  G GRHL G  + G
Sbjct: 198 HPQQHGLGVQNGYGRHLPGHAQMG 221


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 449 CRGVNRATGRRCIASRPGRLVLVQ 378
           CR  +R TG   +++  GRLV+ +
Sbjct: 181 CRTKHRLTGETRLSATKGRLVITE 204



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 405  PTRQAGSGPAGYSG 364
            P+RQ GSG  G+ G
Sbjct: 1923 PSRQTGSGHGGHGG 1936


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 610 FPFRTDPSPSSRGPRREYARTSR 542
           F  R +P P S+GP R++ R+ R
Sbjct: 52  FEPRRNPGPGSKGP-RDFPRSHR 73


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 331 LVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALFTP 444
           L  PPR     PG PR   T L      ++RP   F P
Sbjct: 135 LSSPPRE----PGTPRINFTKLKRHHPRYKRPRTTFEP 168


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -1

Query: 400 PAGWFWSSGVFRDTSGTV 347
           PAGW W    F    G V
Sbjct: 162 PAGWIWGDQGFLKKLGAV 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,743
Number of Sequences: 438
Number of extensions: 4562
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)