Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_D19
         (801 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   312   3e-85
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   312   3e-85
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   312   3e-85
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   312   3e-85
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   312   3e-85

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  312 bits (767), Expect = 3e-85
 Identities = 153/225 (68%), Positives = 176/225 (78%)
 Frame = -1

Query: 771 RAHIMEIQLNGGTXEDKSEMGPEKIWRTXSLXILCLPKMK*LTALVSPRXKDTKVSLFVG 592
           +AH+MEIQLNGG+ EDK +   E + +   +  +   + + +  +   + K  K      
Sbjct: 188 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRW 246

Query: 591 TQRSYPVRHTKVLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 412
             +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 247 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 306

Query: 411 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 232
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 307 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 366

Query: 231 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 97
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 367 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  312 bits (767), Expect = 3e-85
 Identities = 153/225 (68%), Positives = 176/225 (78%)
 Frame = -1

Query: 771 RAHIMEIQLNGGTXEDKSEMGPEKIWRTXSLXILCLPKMK*LTALVSPRXKDTKVSLFVG 592
           +AH+MEIQLNGG+ EDK +   E + +   +  +   + + +  +   + K  K      
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRW 235

Query: 591 TQRSYPVRHTKVLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 412
             +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295

Query: 411 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 232
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355

Query: 231 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 97
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  312 bits (767), Expect = 3e-85
 Identities = 153/225 (68%), Positives = 176/225 (78%)
 Frame = -1

Query: 771 RAHIMEIQLNGGTXEDKSEMGPEKIWRTXSLXILCLPKMK*LTALVSPRXKDTKVSLFVG 592
           +AH+MEIQLNGG+ EDK +   E + +   +  +   + + +  +   + K  K      
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRW 222

Query: 591 TQRSYPVRHTKVLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 412
             +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282

Query: 411 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 232
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342

Query: 231 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 97
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  312 bits (767), Expect = 3e-85
 Identities = 153/225 (68%), Positives = 176/225 (78%)
 Frame = -1

Query: 771 RAHIMEIQLNGGTXEDKSEMGPEKIWRTXSLXILCLPKMK*LTALVSPRXKDTKVSLFVG 592
           +AH+MEIQLNGG+ EDK +   E + +   +  +   + + +  +   + K  K      
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRW 222

Query: 591 TQRSYPVRHTKVLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 412
             +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282

Query: 411 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 232
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342

Query: 231 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 97
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  312 bits (767), Expect = 3e-85
 Identities = 153/225 (68%), Positives = 176/225 (78%)
 Frame = -1

Query: 771 RAHIMEIQLNGGTXEDKSEMGPEKIWRTXSLXILCLPKMK*LTALVSPRXKDTKVSLFVG 592
           +AH+MEIQLNGG+ EDK +   E + +   +  +   + + +  +   + K  K      
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRW 235

Query: 591 TQRSYPVRHTKVLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 412
             +  P +  K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295

Query: 411 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 232
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355

Query: 231 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 97
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,539,793
Number of Sequences: 53049
Number of extensions: 766453
Number of successful extensions: 1963
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1953
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)