Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_D16
(1030 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.082
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.082
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.082
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.082
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.082
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.082
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 33 0.33
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.3
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 31 1.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.8
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 31 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 2.3
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 2.3
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 30 2.3
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 2.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 3.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 24 6.3
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 24 6.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 7.1
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 7.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 7.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 7.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 7.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 7.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 7.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 7.6
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 9.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.082
Identities = 31/115 (26%), Positives = 33/115 (28%)
Frame = +1
Query: 358 PPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXX 537
PP K+ G P PPPPP P T PP GG GG
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP-ITGGPPPP 745
Query: 538 XXXXXXXXXXKKQXXGGGGXGXXAXSXXXXWGXXXPPPPPPAPXXGXRXXPXXPP 702
GG PPPPPP P G + P PP
Sbjct: 746 PPPGGLPPI-------SGGPPPPPPPPGGC-----PPPPPPPPPGGFKGGPPPPP 788
Score = 33.5 bits (73), Expect = 0.25
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = -3
Query: 500 PPPPXEGGXXXVXGXPXGGG--GGVXXXGXXLXXXPKKXXPXXVKILGGGXXXPPPPXPP 327
PPPP GG + G P GG+ + P P GG PPPP PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPP----ISGGPPPPPPPP-----GGCPPPPPPPPP 777
Query: 326 GXGKXXP 306
G K P
Sbjct: 778 GGFKGGP 784
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 647 GGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPPPPXEGGXXX 468
GG P P PPPP G PP PPPP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 467 VXGXPXGGG 441
P GG
Sbjct: 771 PPPPPPPGG 779
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 289 PPKKXXGXXXPXPGGWGG--GGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXP 462
PP P PGG GG PPP G PPPPP G P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP----------GGLPPISGGPPPPPPPPGGCP 769
Query: 463 XTXXXPPSXGGGG 501
PP G G
Sbjct: 770 PPPPPPPPGGFKG 782
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 652 GGAGXPXPXXXXXXXXAXPPPPPPXXVF 569
GG P P PPPPPP +F
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.082
Identities = 31/115 (26%), Positives = 33/115 (28%)
Frame = +1
Query: 358 PPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXX 537
PP K+ G P PPPPP P T PP GG GG
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP-ITGGPPPP 745
Query: 538 XXXXXXXXXXKKQXXGGGGXGXXAXSXXXXWGXXXPPPPPPAPXXGXRXXPXXPP 702
GG PPPPPP P G + P PP
Sbjct: 746 PPPGGLPPI-------SGGPPPPPPPPGGC-----PPPPPPPPPGGFKGGPPPPP 788
Score = 33.5 bits (73), Expect = 0.25
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = -3
Query: 500 PPPPXEGGXXXVXGXPXGGG--GGVXXXGXXLXXXPKKXXPXXVKILGGGXXXPPPPXPP 327
PPPP GG + G P GG+ + P P GG PPPP PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPP----ISGGPPPPPPPP-----GGCPPPPPPPPP 777
Query: 326 GXGKXXP 306
G K P
Sbjct: 778 GGFKGGP 784
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 647 GGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPPPPXEGGXXX 468
GG P P PPPP G PP PPPP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 467 VXGXPXGGG 441
P GG
Sbjct: 771 PPPPPPPGG 779
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 289 PPKKXXGXXXPXPGGWGG--GGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXP 462
PP P PGG GG PPP G PPPPP G P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP----------GGLPPISGGPPPPPPPPGGCP 769
Query: 463 XTXXXPPSXGGGG 501
PP G G
Sbjct: 770 PPPPPPPPGGFKG 782
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 652 GGAGXPXPXXXXXXXXAXPPPPPPXXVF 569
GG P P PPPPPP +F
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.082
Identities = 31/115 (26%), Positives = 33/115 (28%)
Frame = +1
Query: 358 PPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXX 537
PP K+ G P PPPPP P T PP GG GG
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP-ITGGPPPP 328
Query: 538 XXXXXXXXXXKKQXXGGGGXGXXAXSXXXXWGXXXPPPPPPAPXXGXRXXPXXPP 702
GG PPPPPP P G + P PP
Sbjct: 329 PPPGGLPPI-------SGGPPPPPPPPGGC-----PPPPPPPPPGGFKGGPPPPP 371
Score = 33.5 bits (73), Expect = 0.25
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = -3
Query: 500 PPPPXEGGXXXVXGXPXGGG--GGVXXXGXXLXXXPKKXXPXXVKILGGGXXXPPPPXPP 327
PPPP GG + G P GG+ + P P GG PPPP PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPP----ISGGPPPPPPPP-----GGCPPPPPPPPP 360
Query: 326 GXGKXXP 306
G K P
Sbjct: 361 GGFKGGP 367
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 647 GGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPPPPXEGGXXX 468
GG P P PPPP G PP PPPP GG
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 467 VXGXPXGGG 441
P GG
Sbjct: 354 PPPPPPPGG 362
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 289 PPKKXXGXXXPXPGGWGG--GGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXP 462
PP P PGG GG PPP G PPPPP G P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPP----------GGLPPISGGPPPPPPPPGGCP 352
Query: 463 XTXXXPPSXGGGG 501
PP G G
Sbjct: 353 PPPPPPPPGGFKG 365
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 652 GGAGXPXPXXXXXXXXAXPPPPPPXXVF 569
GG P P PPPPPP +F
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.082
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = +1
Query: 283 NPPPKKXXGXXXPXPGGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXP 462
+PPP G P G PPP + G PPPPP G P
Sbjct: 254 SPPPPPAAGSPPPPRTG------SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Query: 463 XTXXXPPSXGGG 498
T PP GG
Sbjct: 308 PTGSLPPPQAGG 319
Score = 31.5 bits (68), Expect = 1.0
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +2
Query: 248 KXGPPFXXKXFXTPPPKKXXGXXXPPX-GXXXXXXXXTPPPKF*XKXAXFFXGGXXKXXX 424
K PP +PPP G PP G +PPP G
Sbjct: 244 KGSPPLAGSG--SPPPPPAAGSPPPPRTGSPPPPPTGSPPPP---------PAGGSPPPP 292
Query: 425 XKXHPPPPPXGRXXXXXXLLPXGXGGXXKKXXGGGPPXXXP 547
PPPPP R LP G G G P P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.082
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = +1
Query: 283 NPPPKKXXGXXXPXPGGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXP 462
+PPP G P G PPP + G PPPPP G P
Sbjct: 275 SPPPPPAAGSPPPPRTG------SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Query: 463 XTXXXPPSXGGG 498
T PP GG
Sbjct: 329 PTGSLPPPQAGG 340
Score = 31.5 bits (68), Expect = 1.0
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +2
Query: 248 KXGPPFXXKXFXTPPPKKXXGXXXPPX-GXXXXXXXXTPPPKF*XKXAXFFXGGXXKXXX 424
K PP +PPP G PP G +PPP G
Sbjct: 265 KGSPPLAGSG--SPPPPPAAGSPPPPRTGSPPPPPTGSPPPP---------PAGGSPPPP 313
Query: 425 XKXHPPPPPXGRXXXXXXLLPXGXGGXXKKXXGGGPPXXXP 547
PPPPP R LP G G G P P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.082
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = +1
Query: 283 NPPPKKXXGXXXPXPGGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXP 462
+PPP G P G PPP + G PPPPP G P
Sbjct: 260 SPPPPPAAGSPPPPRTG------SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Query: 463 XTXXXPPSXGGG 498
T PP GG
Sbjct: 314 PTGSLPPPQAGG 325
Score = 31.5 bits (68), Expect = 1.0
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +2
Query: 248 KXGPPFXXKXFXTPPPKKXXGXXXPPX-GXXXXXXXXTPPPKF*XKXAXFFXGGXXKXXX 424
K PP +PPP G PP G +PPP G
Sbjct: 250 KGSPPLAGSG--SPPPPPAAGSPPPPRTGSPPPPPTGSPPPP---------PAGGSPPPP 298
Query: 425 XKXHPPPPPXGRXXXXXXLLPXGXGGXXKKXXGGGPPXXXP 547
PPPPP R LP G G G P P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 34.7 bits (76), Expect = 0.11
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +1
Query: 211 PPPPLXXFFFXFXKXAPXXXKKXXNPPPKKXXGXXXPXPGGWGGGGXXXPPPKILTKXGX 390
PPPPL P P P P G GG PPP L
Sbjct: 505 PPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKG 564
Query: 391 LFXGXXXKXXPXXXTPPPPP 450
G K P PPPPP
Sbjct: 565 AVAG--LKSVPGGPPPPPPP 582
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = -1
Query: 649 GAGXPXPXXXXXXXXAXPPPPPPXXVFXKKKKXXG--XXXGGAXPP 518
GA P P PPPPPP + K G GG PP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.58
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -3
Query: 500 PPPPXEGGXXXVXGXPXGGGGGVXXXGXXLXXXPKKXXPXXVKILGG---GXXXPPPPXP 330
PPPP GG G GGGGG G GG G PPP P
Sbjct: 56 PPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPP 115
Query: 329 PGXG 318
P G
Sbjct: 116 PACG 119
Score = 30.7 bits (66), Expect(2) = 0.27
Identities = 25/80 (31%), Positives = 25/80 (31%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXS 615
PPPPP GGGG GG GGGG G
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGC-----------GGGGGGCGGGG 103
Query: 616 XXXXWGXXXPPPPPPAPXXG 675
G PPPPPPA G
Sbjct: 104 GCG--GGCAPPPPPPACGGG 121
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/80 (28%), Positives = 23/80 (28%)
Frame = -1
Query: 820 GXCAGAXXXXXXXRXXXXPGXQSXGXGGXXXXFVGXXXXXEGGXGXXAXXPXGRXGGGAG 641
G C G P G GG G GG G G GGG G
Sbjct: 40 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGG--GGCGGGGG 97
Query: 640 XPXPXXXXXXXXAXPPPPPP 581
A PPPPPP
Sbjct: 98 GCGGGGGCGGGCA-PPPPPP 116
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 583 GGGGXGXXAXSXXXXWGXXXPPPPPPAPXXG 675
GG G G G PPPPPPA G
Sbjct: 34 GGCGGGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 27.9 bits (59), Expect(2) = 0.21
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 701 GGXXGXXRXPXXGAGGGGGGXXXPXXXXXEXAXXPXPPPP 582
GG G G G GGGG P PPPP
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 24.6 bits (51), Expect(2) = 0.21
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 500 PPPPXEGGXXXVXGXPXGGGGG 435
PPPP GG G GGG G
Sbjct: 113 PPPPACGGGCGGGGGGCGGGCG 134
Score = 21.4 bits (43), Expect(2) = 0.27
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 328 GGWGGGGXXXPPP 366
GG GGG PPP
Sbjct: 46 GGCGGGCAPPPPP 58
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 33.1 bits (72), Expect = 0.33
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 581 GGGGGXGGXLXPXXXXGXGXXRPPPXPP 664
GGGGG GG G G PPP PP
Sbjct: 16 GGGGGGGGGGEAGYSGGAGVEAPPPPPP 43
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 583 GGGGXGXXAXSXXXXWGXXXPPPPPPA 663
GGGG G G PPPPPPA
Sbjct: 18 GGGGGGGGEAGYSGGAGVEAPPPPPPA 44
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = -3
Query: 665 GAGGGGGGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPPPPX 486
G GGGGGG P PPPP P P P
Sbjct: 16 GGGGGGGGGGEAGYSGGAGVEAPPPPPPADA-------APAPAPEPAPAPAPEAVPAPAA 68
Query: 485 EGGXXXVXGXPXGGG 441
+ G P GGG
Sbjct: 69 DAGGYAAAAAPAGGG 83
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 581 GGGGGXGGXLXPXXXXGXGXXRPPPXPPRG 670
GGGGG GG G PPP PP G
Sbjct: 190 GGGGGMGGGGGSGGSGGGSGRFPPPPPPYG 219
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 583 GGGGXGXXAXSXXXXWGXXXPPPPPPAPXXGXRXXP 690
GGGG G S G PPPPP G R P
Sbjct: 191 GGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +1
Query: 328 GGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGGGG 501
GG GGGG PPP G G PPP P G GGGG
Sbjct: 40 GGCGGGGGCAPPP--APCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 286 PPPKKXXGXXXPXPGGWGGGGXXXPPP 366
PPP G GG GGGG PPP
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPP 76
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPPSXGGGGXXKKXXGG 525
PPPPP P P S GGG + GG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 557 FFFXKNXXGGGGGXGGXLXPXXXXGXGXXRPPPXPPRG 670
F F GGGGG G G G PPP P G
Sbjct: 20 FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGG 57
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/85 (29%), Positives = 25/85 (29%)
Frame = -3
Query: 674 PXXGAGGGGGGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPP 495
P G GGGGGG PPP G P PP
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP------PP 76
Query: 494 PPXEGGXXXVXGXPXGGGGGVXXXG 420
P GG G GGGGG G
Sbjct: 77 APCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = -1
Query: 763 GXQSXGXGGXXXXFVGXXXXXEGGXGXXAXXPXGRXG--GGAGXPXPXXXXXXXXAXPPP 590
G S G G GG G G G GG G P PPP
Sbjct: 252 GGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Query: 589 PPPXXV 572
P P V
Sbjct: 312 PAPAPV 317
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 285 PPPQKXXXGVFXXPXGXGGGGXXXPPP 365
PPP G G GGGG PPP
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPP 76
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +1
Query: 328 GGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGGGG 501
GG GGGG PPP G G PPP P G GGGG
Sbjct: 40 GGCGGGGGCAPPP--APCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 286 PPPKKXXGXXXPXPGGWGGGGXXXPPP 366
PPP G GG GGGG PPP
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPP 76
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPPSXGGGGXXKKXXGG 525
PPPPP P P S GGG + GG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 557 FFFXKNXXGGGGGXGGXLXPXXXXGXGXXRPPPXPPRG 670
F F GGGGG G G G PPP P G
Sbjct: 20 FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGG 57
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/85 (29%), Positives = 25/85 (29%)
Frame = -3
Query: 674 PXXGAGGGGGGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPP 495
P G GGGGGG PPP G P PP
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP------PP 76
Query: 494 PPXEGGXXXVXGXPXGGGGGVXXXG 420
P GG G GGGGG G
Sbjct: 77 APCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = -1
Query: 763 GXQSXGXGGXXXXFVGXXXXXEGGXGXXAXXPXGRXG--GGAGXPXPXXXXXXXXAXPPP 590
G S G G GG G G G GG G P PPP
Sbjct: 252 GGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Query: 589 PPPXXV 572
P P V
Sbjct: 312 PAPAPV 317
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 285 PPPQKXXXGVFXXPXGXGGGGXXXPPP 365
PPP G G GGGG PPP
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPP 76
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 485 PXGXGGXXKKXXGGGPPXXXPXXFFFFXKNXXGGGGGXGG 604
P G GG K GGG P + GGGGG GG
Sbjct: 327 PVGGGGGGAKSGGGG--GGIPGQSVYMGAGGGGGGGGGGG 364
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPP 702
PPPPPP P G P PP
Sbjct: 39 PPPPPPPPCGGGYEAPPPPP 58
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/90 (26%), Positives = 25/90 (27%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXS 615
PPPPP PP G G + G GG
Sbjct: 287 PPPPPSSGMWPPPPPPPPG-------RTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Query: 616 XXXXWGXXXPPPPPPAPXXGXRXXPXXPPS 705
G PPPPP P G P PPS
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 636 GXPAPPPXR--PXGXXAXXPXPPSXXXXXPTKXXXXPPXP 749
G P PPP R G P PPS P+ PP P
Sbjct: 346 GMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 631 GXXXPPPP--PPAPXXGXRXXPXXPP 702
G PPPP PPAP G P PP
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 524 GGPPXXXPXXFFFFXKNXXGGGGGXGGXLXPXXXXGXGXXRPPPXPPRG 670
GGP P FF GGGG G P PPP PP G
Sbjct: 196 GGPGGFSPLSFFLNGGLGGTGGGGNNGFFVPVPV----VIPPPPPPPPG 240
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/90 (26%), Positives = 25/90 (27%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXS 615
PPPPP PP G G + G GG
Sbjct: 297 PPPPPSSGMWPPPPPPPPG-------RTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Query: 616 XXXXWGXXXPPPPPPAPXXGXRXXPXXPPS 705
G PPPPP P G P PPS
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 636 GXPAPPPXR--PXGXXAXXPXPPSXXXXXPTKXXXXPPXP 749
G P PPP R G P PPS P+ PP P
Sbjct: 356 GMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 631 GXXXPPPP--PPAPXXGXRXXPXXPP 702
G PPPP PPAP G P PP
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPPPP 396
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/80 (28%), Positives = 23/80 (28%)
Frame = +1
Query: 286 PPPKKXXGXXXPXPGGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPX 465
PP G P P G G PPP F P PPPP
Sbjct: 369 PPVSSAPGNFAPPPQS-GPPGAFAPPPSA-------FGAPQGPGGPGGYGPPPPGGPGAP 420
Query: 466 TXXXPPSXGGGGXXKKXXGG 525
PP G GG GG
Sbjct: 421 GSYGPPQGGPGGFGPPPPGG 440
Score = 29.9 bits (64), Expect = 3.1
Identities = 27/99 (27%), Positives = 30/99 (30%), Gaps = 4/99 (4%)
Frame = +1
Query: 211 PPPPLXXFFFXFXKXAPXXXKKXXNPPPKKXXGXXXPX-PGGWGG---GGXXXPPPKILT 378
PPPP+ F PPP P PGG+G GG P
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 379 KXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGG 495
+ G G P PPP G P PP G
Sbjct: 427 QGGPGGFGPPPPGGPGAYGPPPT--GFPPVGAPPPGAAG 463
Score = 28.7 bits (61), Expect = 7.1
Identities = 40/147 (27%), Positives = 42/147 (28%), Gaps = 1/147 (0%)
Frame = +3
Query: 285 PPPQ-KXXXGVFXXPXGXGGGGXXXPPPQNFDXXGPXFFXXXX*XXPXXXNTPPPPXXXA 461
PPPQ G P G GG PP +F P F P PPPP A
Sbjct: 321 PPPQGAPQQGFGAPPQGPPQGG---PPQGSFGAPPPQQFHAPS---PQSFGGPPPPVSSA 374
Query: 462 XXXXXXSFXXGXGXXXKXXGGXAPPXXXPXFFFFXKKTXXGGGGGGXAXXLXXXXXGXGX 641
G G APP P F + GG GG G
Sbjct: 375 PGNFAPPPQSGP------PGAFAPP---PSAFGAPQGP---GGPGGYGPPPPGGPGAPGS 422
Query: 642 PAPPPXRPXGXXAXXPXPPSXXXXXPT 722
PP P G P P PT
Sbjct: 423 YGPPQGGPGGFGPPPPGGPGAYGPPPT 449
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPP 702
PPPPPP P G P PP
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.3
Identities = 30/117 (25%), Positives = 34/117 (29%), Gaps = 3/117 (2%)
Frame = -3
Query: 665 GAGGGGGGXXXPXXXXXEXAXXPXPPPPXXCFFXXXXXXXXXXXXGXPPXXFXXXPPPPX 486
G G G P + A P PPP C PP P P
Sbjct: 123 GRPGAPGRPGNPGPPGRDGALLPGPPPKPPC----QKCPPGPPGPAGPPGP-KGLPGPQG 177
Query: 485 EGGXXXVXGXP--XGGGGGVXXXGXXLXXXPKKXXPXXVKILGGGXXXPP-PPXPPG 324
+ G G P G G G K K++ G PP PP PPG
Sbjct: 178 DAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPG 234
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 442 PPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXSXX 621
P G P P G GG GG +Q GGGG G
Sbjct: 232 PAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQ 291
Query: 622 XXWG 633
WG
Sbjct: 292 GGWG 295
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 442 PPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXSXX 621
P G P P G GG GG +Q GGGG G
Sbjct: 194 PAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQ 253
Query: 622 XXWG 633
WG
Sbjct: 254 GGWG 257
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 442 PPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXSXX 621
P G P P G GG GG +Q GGGG G
Sbjct: 232 PAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQ 291
Query: 622 XXWG 633
WG
Sbjct: 292 GGWG 295
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPPS 705
PPPPPP P P PPS
Sbjct: 477 PPPPPPPPENEPEEFPPPPPS 497
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 583 GGGGXGXXAXSXXXXWGXXXPPPPPPAPXXG 675
GGGG G +G PPPPPP P G
Sbjct: 51 GGGGCGYGGG-----YGCGIPPPPPPPPQCG 76
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 697 GGXGXXAXXPXGRXGGGAGXPXPXXXXXXXXAXPPPPPP 581
GG G A GGG+ P P PPPPP
Sbjct: 640 GGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPPP 678
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 697 GGXGXXAXXPXGRXGGGAGXPXPXXXXXXXXAXPPPPPP 581
GG G A GGG+ P P PPPPP
Sbjct: 640 GGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPPP 678
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPP 702
PPPPPP P P PP
Sbjct: 794 PPPPPPLPPISSGAPPPPPP 813
Score = 25.8 bits (54), Expect(2) = 4.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 386 PXXVKILGGGXXXPPPPXPPG 324
P + + G PPPP PPG
Sbjct: 797 PPPLPPISSGAPPPPPPPPPG 817
Score = 21.8 bits (44), Expect(2) = 4.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 347 PPPPXPPGXG 318
PPPP PP G
Sbjct: 809 PPPPPPPPGG 818
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPP 702
PPPPPP P P PP
Sbjct: 794 PPPPPPLPPISSGAPPPPPP 813
Score = 25.8 bits (54), Expect(2) = 4.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 386 PXXVKILGGGXXXPPPPXPPG 324
P + + G PPPP PPG
Sbjct: 797 PPPLPPISSGAPPPPPPPPPG 817
Score = 21.8 bits (44), Expect(2) = 4.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 347 PPPPXPPGXG 318
PPPP PP G
Sbjct: 809 PPPPPPPPGG 818
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 646 PPPPPAPXXGXRXXPXXPP 702
PPPPPAP PP
Sbjct: 50 PPPPPAPYPQQAVPAPAPP 68
Score = 23.4 bits (48), Expect(2) = 6.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 643 PPPPPPAP 666
PPPPPP P
Sbjct: 26 PPPPPPPP 33
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +1
Query: 421 PXXXTPPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXG 600
P P PP P GGGG GG GGGG G
Sbjct: 63 PPQPCPAPPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGG 122
Score = 23.4 bits (48), Expect(2) = 6.3
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 583 GGGGXGXXAXSXXXXWGXXXPPPPPPAPXXGXRXXP 690
GGGG G + G P PAP G P
Sbjct: 126 GGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPP 161
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +1
Query: 289 PPKKXXGXXXPXPGGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXT 468
PP G P PG GG PPP +F G P PPPP
Sbjct: 66 PPPVPNGFIPPPPGP---GGIPPPPP--------MFAGGIPPPPPMMGGIPPPPPMFGAP 114
Query: 469 XXXPPSXGGG 498
PP G G
Sbjct: 115 PPPPPPSGLG 124
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 636 GXPAPPPXRPXGXXAXXPXPP 698
G P PPP P G A P PP
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPP 252
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +1
Query: 319 PXPGGWGGGGXXXPPPKILTKXGXLFXGXXXKXXPXXXTPPPPPXGXPXTXXXPPSXGGG 498
P P G GG PP G G P PP P G P T P + G
Sbjct: 177 PGPAGPAGGPGPAGPPGPAGADGNTPSGGGE--GPAGPPGPPGPAGNPGTDGAPGNPGAP 234
Query: 499 GXXKKXXG 522
G + G
Sbjct: 235 GQVTETPG 242
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPPSXGGGGXXKKXXGGXXXXXXXXXXXXXXKKQXXGGGGXGXXAXS 615
PP P G P GGGG GG GGGG G A +
Sbjct: 314 PPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAA 373
Query: 616 ---XXXXWGXXXPPPPPPAP 666
G P PAP
Sbjct: 374 GGGYNAGGGGGGAPQAAPAP 393
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 636 GXPAPPPXRPXGXXAXXPXPP 698
G P PPP P G A P PP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 636 GXPAPPPXRPXGXXAXXPXPP 698
G P PPP P G A P PP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPP 238
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 586 GGGXGXXAXSXXXXWGXXXPPPPPPAPXXG 675
GGG G A + PPPPPPAP G
Sbjct: 50 GGGGGSYAAAP----ALPPPPPPPPAPIGG 75
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 586 GGGXGXXAXSXXXXWGXXXPPPPPPAPXXG 675
GGG G A + PPPPPPAP G
Sbjct: 50 GGGGGSYAAAP----ALPPPPPPPPAPIGG 75
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -3
Query: 401 PKKXXPXXVKILGGGXXXPPPPXPPGXGKXXPXXFLG 291
P P + IL PPPP PP P LG
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILG 105
Score = 25.4 bits (53), Expect(2) = 7.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 436 PPPPPXGXPXTXXXPP 483
PPPPP P T PP
Sbjct: 84 PPPPPPPPPPTLKAPP 99
Score = 21.4 bits (43), Expect(2) = 7.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 433 TPPPPPXGXP 462
TPPPPP P
Sbjct: 66 TPPPPPPPPP 75
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 485 PXGXGGXXKKXXGGGPPXXXPXXFFFFXKNXXGGGGGXGGXLXPXXXXGXGXXRPPPXPP 664
P G GG K G G P P + GGGGG G G P P
Sbjct: 27 PAGGGGGASKVGGAGAP---PPGTSVYMGAGAGGGGGGGAQSAYFAVGGAPVGGAPAAVP 83
Query: 665 RG 670
G
Sbjct: 84 MG 85
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 701 GGXXGXXRXPXXGAGGGGGGXXXPXXXXXEXAXXPXPPPP 582
GG G G GGGGGG P PP P
Sbjct: 85 GGAGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGP 124
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 583 GGGGXGXXAXSXXXXWGXXXPPPPPPAPXXGXRXXPXXP 699
GGGG G A G P PP P G P P
Sbjct: 99 GGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKP 137
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 9.4
Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = -3
Query: 500 PPPPXEGGXXXVXGXPXGGGGGVXXXGXXLXXXPKKXXPXXVKILGGGXXXPPPPXPP-- 327
PPPP P G GGG G L P P + LGGG PPP P
Sbjct: 31 PPPPPPS--------PCGCGGG---GGLALPQLP----PLSLPSLGGGGGCCPPPAPACG 75
Query: 326 -GXGKXXPXXFLGGGF 282
G G +GGG+
Sbjct: 76 GGCGGGVAPAPIGGGY 91
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPPSNXXXXQXXXXXLPXXXFASLXXXRPA 783
PPPPPP P PP Q F ++ RPA
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPPAQQKPSFQSDREQFRTMRPLRPA 201
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPP 702
PPPPPP P P PP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPP 1358
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 643 PPPPPPAPXXGXRXXPXXPP 702
PPPPPP P P PP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPP 1360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.149 0.529
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,396,947
Number of Sequences: 27780
Number of extensions: 469084
Number of successful extensions: 3957
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3045
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -